3DAL

Methyltransferase domain of human PR domain-containing protein 1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.196 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

The crystal structure of methyltransferase domain of human PR domain-containing protein 1

Zeng, H.Amaya, M.F.Antoshenko, T.Dong, A.Loppnau, P.Bochkarev, A.Min, J.Plotnikov, A.N.Wu, H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PR domain zinc finger protein 1
A, B
196Homo sapiensMutation(s): 0 
Gene Names: PRDM1 (BLIMP1)
EC: 2.1.1.-
Find proteins for O75626 (Homo sapiens)
Go to Gene View: PRDM1
Go to UniProtKB:  O75626
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.65 Å
  • R-Value Free: 0.217 
  • R-Value Work: 0.196 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 64.834α = 90.00
b = 64.960β = 90.00
c = 112.663γ = 90.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
DENZOdata reduction
REFMACrefinement
SCALEPACKdata scaling
PHASESphasing

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-08-12
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-10-25
    Type: Refinement description