Crystal structure of putative glucan synthesis regulator of Smi1/Knr4 family (YP_211376.1) from Bacteroides fragilis NCTC 9343 at 1.45 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
Experimental Data Snapshot
wwPDB Validation 3D Report Full Report
Find similar proteins by: Sequence  |  Structure
Entity ID: 1 | ||||
---|---|---|---|---|
Molecule | Chains | Sequence Length | Organism | Details |
putative glucan synthesis regulator of Smi1/Knr4 family | A, B | 144 | Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343) | Mutation(s): 0  |
Find proteins for Q5LEL2 (Bacteroides fragilis (strain ATCC 25285 / DSM 2151 / JCM 11019 / NCTC 9343)) Go to UniProtKB:  Q5LEL2 |
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ACT Query on ACT | A, B | ACETATE ION C2 H3 O2 QTBSBXVTEAMEQO-UHFFFAOYSA-M | ![]() |  Ligand Interaction | |
GOL Query on GOL | B | GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N | ![]() |  Ligand Interaction | |
PEG Query on PEG | B | DI(HYDROXYETHYL)ETHER C4 H10 O3 MTHSVFCYNBDYFN-UHFFFAOYSA-N | ![]() |  Ligand Interaction |
Modified Residues  1 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Type | Formula | 2D Diagram | Parent |
MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se | ![]() | MET |
Length (Å) | Angle (°) |
---|---|
a = 57.058 | α = 90.00 |
b = 69.508 | β = 90.00 |
c = 75.093 | γ = 90.00 |
Software Name | Purpose |
---|---|
MOSFLM | data reduction |
MolProbity | model building |
PDB_EXTRACT | data extraction |
SHELX | phasing |
SHELXD | phasing |
autoSHARP | phasing |
REFMAC | refinement |
PHENIX | refinement |
SCALA | data scaling |