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Download EndnoteA triply ligated crystal structure of relaxed state human hemoglobin
Jenkins, J., Musayev, F.N., Abraham, D.J., Safo, M.K.To be published.
3D17
A triply ligated crystal structure of relaxed state human hemoglobin
- DOI: 10.2210/pdb3D17/pdb
- Classification: OXYGEN BINDING
- Organism(s): Homo sapiens
- Deposited: 2008-05-05 Released: 2008-06-03
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.8 Å
- R-Value Free: 0.297
- R-Value Work: 0.232
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Hemoglobin subunit alpha | A, C | 141 | Homo sapiens | Gene Names: HBA1, HBA2 |
Find proteins for P69905 (Homo sapiens) Go to UniProtKB: P69905 | ||||
Entity ID: 2 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Hemoglobin subunit beta | B, D | 146 | Homo sapiens | Gene Names: HBB |
Find proteins for P68871 (Homo sapiens) Go to Gene View: HBB Go to UniProtKB: P68871 | ||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| MBN Query on MBN | A | TOLUENE C7 H8 YXFVVABEGXRONW-UHFFFAOYSA-N |  | Ligand Interaction | |
| PO4 Query on PO4 | B, D | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | Ligand Interaction | |
| HEM Query on HEM | A, B, C, D | PROTOPORPHYRIN IX CONTAINING FE HEME C34 H32 Fe N4 O4 KABFMIBPWCXCRK-RGGAHWMASA-L |  | Ligand Interaction | |
| CMO Query on CMO | A, B, D | CARBON MONOXIDE C O UGFAIRIUMAVXCW-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.8 Å
- R-Value Free: 0.297
- R-Value Work: 0.232
- Space Group: P 41 21 2
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 87.282 | α = 90.00 |
| b = 87.282 | β = 90.00 |
| c = 174.466 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| AMoRE | phasing |
| d*TREK | data scaling |
| d*TREK | data reduction |
| CNS | refinement |
| PDB_EXTRACT | data extraction |
Entry History
Deposition Data
- Deposited Date: 2008-05-05
- Released Date: 2008-06-03
- Deposition Author(s): Safo, M.K., Musayev, F.N., Jenkins, J., Abraham, D.J.
Revision History
- Version 1.0: 2008-06-03
Type: Initial release - Version 1.1: 2011-07-13
Type: Version format compliance
