3CZM

T. Gondii bradyzoite-specific LDH (LDH2) in complex with NAD and OXQ


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.223 
  • R-Value Work: 0.166 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

T. Gondii bradyzoite-specific LDH (LDH2) in complex with NAD and OXQ

Wilson, D.K.Susko, M.S.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
L-lactate dehydrogenase
A, B
326Toxoplasma gondiiMutation(s): 1 
EC: 1.1.1.27
Find proteins for Q27797 (Toxoplasma gondii)
Go to UniProtKB:  Q27797
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NAD
Query on NAD

Download SDF File 
Download CCD File 
A, B
NICOTINAMIDE-ADENINE-DINUCLEOTIDE
C21 H27 N7 O14 P2
BAWFJGJZGIEFAR-NNYOXOHSSA-N
 Ligand Interaction
OXQ
Query on OXQ

Download SDF File 
Download CCD File 
A, B
4-HYDROXY-1,2,5-OXADIAZOLE-3-CARBOXYLIC ACID
C3 H2 N2 O4
IBRWUZLLHSXPKL-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.223 
  • R-Value Work: 0.166 
  • Space Group: P 3 2 1
Unit Cell:
Length (Å)Angle (°)
a = 140.949α = 90.00
b = 140.949β = 90.00
c = 75.010γ = 120.00
Software Package:
Software NamePurpose
HKL-2000data reduction
REFMACrefinement
HKL-2000data collection
EPMRphasing
HKL-2000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-06-02
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance