3CUG

Cellulomonas fimi Xylanase/Cellulase Cex (Cf Xyn10A) in complex with cellotetraose-like isofagomine


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.68 Å
  • R-Value Free: 0.178 
  • R-Value Work: 0.146 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Probing the binding sites of Family 10 and 11 Xylanases with extended Oligosaccharides

Poon, D.K.Y.D'Angelo, I.D.Kuntz, D.A.Kantner, T.Ludkiwzek, M.L.Tarling, C.Rose, D.R.Saul, M.McIntosh, L.P.Withers, S.G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Exo-beta-1,4-glucanase
A
315Cellulomonas fimiMutation(s): 0 
Gene Names: cex (xynB)
Find proteins for P07986 (Cellulomonas fimi)
Go to UniProtKB:  P07986
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
G3I
Query on G3I

Download SDF File 
Download CCD File 
A
(3R,4R,5R)-3-hydroxy-5-(hydroxymethyl)piperidin-4-yl beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranosyl-(1->4)-beta-D-glucopyranoside
Cellotetraose-like isofagomine, Cellotriosyl isofagomine
C24 H43 N O18
WWLNURYAWFMUKB-QPKZCLDCSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.68 Å
  • R-Value Free: 0.178 
  • R-Value Work: 0.146 
  • Space Group: P 41 21 2
Unit Cell:
Length (Å)Angle (°)
a = 85.722α = 90.00
b = 85.722β = 90.00
c = 79.042γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
CNSrefinement
CNSphasing
DENZOdata reduction
SCALEPACKdata scaling
MAR345dtbdata collection
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-04-21
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-10-25
    Type: Refinement description
  • Version 1.3: 2019-07-24
    Type: Data collection, Refinement description