Macromolecule Content

Total Structure Weight: 67147.92
Atom Count: 4226
Residue Count: 582
Unique protein chains: 1

3CUC

CRYSTAL STRUCTURE OF A FIC DOMAIN CONTAINING SIGNALING PROTEIN (BT_2513) FROM BACTEROIDES THETAIOTAOMICRON VPI-5482 AT 2.71 A RESOLUTION

DOI: 10.2210/pdb3CUC/pdb

Classification: SIGNALING PROTEIN
Organism(s): Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)
Expression System: Escherichia coli

Deposited: 2008-04-16 Released: 2008-04-29
Deposition Author(s): Joint Center for Structural Genomics (JCSG)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.71 Å
R-Value Free: 0.248
R-Value Work: 0.222

wwPDB Validation3D Report Full Report

This is version 1.2 of the entry. See complete history.

Literature

Crystal structure of Protein of Unknown Function with a Fic Domain (NP_811426.1) from Bacteroides thetaiotaomicron VPI-5482 at 2.71 A resolution

Joint Center for Structural Genomics (JCSG)

To be published.

Macromolecules

Find similar proteins by: Sequence | Structure

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details
Protein of unknown function with a Fic domain	A, B	291	Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)	Mutation(s): 0
Find proteins for Q8A4T4 (Bacteroides thetaiotaomicron (strain ATCC 29148 / DSM 2079 / NCTC 10582 / E50 / VPI-5482)) Go to UniProtKB: Q8A4T4
Protein Feature View Full Protein Feature View for Q8A4T4

Small Molecules

Modified Residues 1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE Query on MSE	A, B	L-PEPTIDE LINKING	C₅ H₁₁ N O₂ Se		MET

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.71 Å
R-Value Free: 0.248
R-Value Work: 0.222
Space Group: P 3₁ 2 1
Diffraction Data DOI:
10.18430/M33CUC Protein Diffraction

Unit Cell:

Length (Å)	Angle (°)
a = 138.725	α = 90.00
b = 138.725	β = 90.00
c = 120.723	γ = 120.00

Software Package:

Software Name	Purpose
MolProbity	model building
SHELX	phasing
MAR345	data collection
PDB_EXTRACT	data extraction
PHENIX	refinement
REFMAC	refinement
SCALA	data scaling
SHELXD	phasing
autoSHARP	phasing
MOSFLM	data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots

Entry History

Deposition Data

Deposited Date: 2008-04-16
Released Date: 2008-04-29
Deposition Author(s): Joint Center for Structural Genomics (JCSG)

Revision History

Version 1.0: 2008-04-29
Type: Initial release
Version 1.1: 2011-07-13
Type: Advisory, Version format compliance
Version 1.2: 2017-10-25
Type: Refinement description

The RCSB PDB is funded by a grant (DBI-1338415) from the National Science Foundation, the National Institutes of Health, and the US Department of Energy.