3CQY

Crystal structure of a functionally unknown protein (SO_1313) from Shewanella oneidensis MR-1


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.173 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

The structure of a functionally unknown protein (SO_1313) from Shewanella oneidensis MR-1.

Tan, K.Evdokimova, E.Kudritska, M.Savchenko, A.Edwards, A.M.Joachimiak, A.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Anhydro-N-acetylmuramic acid kinase
A, B
370Shewanella oneidensis (strain MR-1)Mutation(s): 0 
Gene Names: anmK
EC: 2.7.1.170
Find proteins for Q8EHB5 (Shewanella oneidensis (strain MR-1))
Go to UniProtKB:  Q8EHB5
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
SIN
Query on SIN

Download SDF File 
Download CCD File 
A
SUCCINIC ACID
C4 H6 O4
KDYFGRWQOYBRFD-UHFFFAOYSA-N
 Ligand Interaction
CL
Query on CL

Download SDF File 
Download CCD File 
A, B
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.3 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.173 
  • Space Group: P 43 21 2
Unit Cell:
Length (Å)Angle (°)
a = 147.816α = 90.00
b = 147.816β = 90.00
c = 117.687γ = 90.00
Software Package:
Software NamePurpose
SBC-Collectdata collection
DMphasing
RESOLVEphasing
SHELXDphasing
MLPHAREphasing
HKL-3000data reduction
REFMACrefinement
HKL-3000phasing
HKL-3000data scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-04-22
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Source and taxonomy, Version format compliance