3CMN | pdb_00003cmn

Crystal structure of a putative hydrolase with a novel fold from Chloroflexus aurantiacus

PDB DOI: https://doi.org/10.2210/pdb3CMN/pdb

Classification: HYDROLASE
Organism(s): Chloroflexus aurantiacus J-10-fl
Expression System: Escherichia coli
Mutation(s): No

Deposited: 2008-03-24 Released: 2008-04-08
Deposition Author(s): Agarwal, R., Burley, S.K., Swaminathan, S., New York SGX Research Center for Structural Genomics (NYSGXRC)

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.25 Å
R-Value Free:
0.289 (Depositor), 0.289 (DCC)
R-Value Work:
0.247 (Depositor), 0.250 (DCC)
R-Value Observed:
0.247 (Depositor)

wwPDB Validation 3D Report Full Report

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This is version 1.3 of the entry. See complete history.

Literature

Crystal structure of a putative hydrolase with a novel fold from Chloroflexus aurantiacus.

Agarwal, R., Burley, S.K., Swaminathan, S.

To be published.

Macromolecule Content

Total Structure Weight: 42.7 kDa
Atom Count: 2,515
Modeled Residue Count: 298
Deposited Residue Count: 372
Unique protein chains: 1

Macromolecules

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Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative hydrolase	A	372	Chloroflexus aurantiacus J-10-fl	Mutation(s): 0 Gene Names: Caur_0242
UniProt
Find proteins for A9WCA2 (Chloroflexus aurantiacus (strain ATCC 29366 / DSM 635 / J-10-fl)) Explore A9WCA2 Go to UniProtKB: A9WCA2
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	A9WCA2
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.25 Å
R-Value Free: 0.289 (Depositor), 0.289 (DCC)
R-Value Work: 0.247 (Depositor), 0.250 (DCC)
R-Value Observed: 0.247 (Depositor)

Space Group: P 4₂ 2₁ 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 75.968	α = 90
b = 75.968	β = 90
c = 124.718	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
CBASS	data collection
HKL-2000	data reduction
HKL-2000	data scaling
SCALEPACK	data scaling
SHELXD	phasing
SHARP	phasing

Structure Validation

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Entry History

Deposition Data

Released Date: 2008-04-08

Deposition Author(s):

Swaminathan, S.

New York SGX Research Center for Structural Genomics (NYSGXRC)

Revision History (Full details and data files)

Version 1.0: 2008-04-08
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2021-02-03
Changes: Database references, Structure summary
Version 1.3: 2024-02-21
Changes: Data collection, Database references

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.