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Download EndnoteCrystal structure of putative glutathione S-transferase (YP_295234.1) from Ralstonia eutropha JMP134 at 2.05 A resolution
Joint Center for Structural Genomics (JCSG)To be published.
3CBU
Crystal structure of a putative glutathione s-transferase (reut_a1011) from ralstonia eutropha jmp134 at 2.05 A resolution
- DOI: 10.2210/pdb3CBU/pdb
- Classification: TRANSFERASE
- Organism(s): Cupriavidus necator (strain JMP 134 / LMG 1197)
- Expression System: Escherichia coli
- Deposited: 2008-02-22 Released: 2008-03-04
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.05 Å
- R-Value Free: 0.207
- R-Value Work: 0.171
wwPDB Validation 3D Report Full Report
This is version 1.2 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| Probable gst-related protein | A, B | 214 | Cupriavidus necator (strain JMP 134 / LMG 1197) | Mutation(s): 0 |
Find proteins for Q473P3 (Cupriavidus necator (strain JMP 134 / LMG 1197)) Go to UniProtKB: Q473P3 | ||||
Small Molecules
| Ligands 2 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| PO4 Query on PO4 | A | PHOSPHATE ION O4 P NBIIXXVUZAFLBC-UHFFFAOYSA-K |  | Ligand Interaction | |
| EDO Query on EDO | A, B | 1,2-ETHANEDIOL ETHYLENE GLYCOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | Ligand Interaction | |
| Modified Residues 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Type | Formula | 2D Diagram | Parent |
| MSE Query on MSE | A, B | L-PEPTIDE LINKING | C5 H11 N O2 Se |  | MET |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.05 Å
- R-Value Free: 0.207
- R-Value Work: 0.171
- Space Group: P 43 2 2
- Diffraction Data DOI:
10.18430/M33CBU Protein Diffraction
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 106.840 | α = 90.00 |
| b = 106.840 | β = 90.00 |
| c = 113.620 | γ = 90.00 |
| Software Name | Purpose |
|---|---|
| autoSHARP | phasing |
| REFMAC | refinement |
| PDB_EXTRACT | data extraction |
| XDS | data reduction |
| MolProbity | model building |
| PHENIX | refinement |
| SHELX | phasing |
| XSCALE | data scaling |
| MAR345 | data collection |
| SHELXD | phasing |
Entry History
Deposition Data
- Deposited Date: 2008-02-22
- Released Date: 2008-03-04
- Deposition Author(s): Joint Center for Structural Genomics (JCSG)
Revision History
- Version 1.0: 2008-03-04
Type: Initial release - Version 1.1: 2011-07-13
Type: Advisory, Source and taxonomy, Version format compliance - Version 1.2: 2017-10-25
Type: Refinement description
