3CBI

Crystal structure of the ternary complex of phospholipase A2 with ajmaline and anisic acid at 3.1 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.15 Å
  • R-Value Free: 0.250 
  • R-Value Work: 0.228 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of the ternary complex of phospholipase A2 with ajmaline and anisic acid at 3.1 A resolution

Kumar, S.Vikram, G.Singh, N.Sharma, S.Kaur, P.Singh, T.P.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Phospholipase A2 VRV-PL-VIIIa
A, B, C, D
121Daboia russeliiMutation(s): 0 
EC: 3.1.1.4
Find proteins for P59071 (Daboia russelii)
Go to UniProtKB:  P59071
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
AJM
Query on AJM

Download SDF File 
Download CCD File 
A, B, C, D
AJMALINE
C18 H22 N2 O2
CFEPCEVMXPTZPJ-OGDRVKPDSA-N
 Ligand Interaction
ANN
Query on ANN

Download SDF File 
Download CCD File 
A, B, C, D
4-METHOXYBENZOIC ACID
P-ANISIC ACID
C8 H8 O3
ZEYHEAKUIGZSGI-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 3.15 Å
  • R-Value Free: 0.250 
  • R-Value Work: 0.228 
  • Space Group: P 32
Unit Cell:
Length (Å)Angle (°)
a = 108.799α = 90.00
b = 108.799β = 90.00
c = 43.339γ = 120.00
Software Package:
Software NamePurpose
AMoREphasing
DENZOdata reduction
AUTOMARdata reduction
SCALEPACKdata scaling
CNSrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-03-11
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance