3CBA

Crystal structure of Lipopeptide Detergent (LPD-12) (Hexagonal)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.184 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Packing and Twinning in Orthorhombic and Hexagonal Crystals of Lipopeptide Detergent (LPD-12)

Ho, D.N.Pomroy, N.C.Cuesta-Seijo, J.A.Prive, G.G.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
LPD-12
A, B, C, D, E, F, G, H, I, J, K, L
27N/AN/A
Protein Feature View is not available: No corresponding UniProt sequence found.
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
DMU
Query on DMU

Download SDF File 
Download CCD File 
A, B, D, F, G, H, I, J, K, L
DECYL-BETA-D-MALTOPYRANOSIDE
DECYLMALTOSIDE
C22 H42 O11
WOQQAWHSKSSAGF-WXFJLFHKSA-N
 Ligand Interaction
Modified Residues  3 Unique
IDChainsTypeFormula2D DiagramParent
O12
Query on O12
A, B, C, D, E, F, G, H, I, J, K, L
L-peptide linkingC17 H34 N2 O3

--

NH2
Query on NH2
A, B, C, D, E, F, G, H, I, J, K, L
NON-POLYMERH2 N

--

ACE
Query on ACE
A, B, C, D, E, F, G, H, I, J, K, L
NON-POLYMERC2 H4 O

--

Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.7 Å
  • R-Value Free: 0.243 
  • R-Value Work: 0.184 
  • Space Group: P 64
Unit Cell:
Length (Å)Angle (°)
a = 127.261α = 90.00
b = 127.261β = 90.00
c = 42.850γ = 120.00
Software Package:
Software NamePurpose
PHASERphasing
HKL-2000data scaling
SHELXL-97refinement
HKL-2000data collection
HKL-2000data reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-09-09
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance