3C5H

Crystal structure of the Ras homolog domain of human GRLF1 (p190RhoGAP)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.247 
  • R-Value Work: 0.205 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of the Ras homolog domain of human GRLF1 (p190RhoGAP).

Shen, L.Tong, Y.Tempel, W.MacKenzie, F.Arrowsmith, C.H.Edwards, A.M.Bountra, C.Weigelt, J.Bochkarev, A.Park, H.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Glucocorticoid receptor DNA-binding factor 1
A
255Homo sapiensMutation(s): 0 
Gene Names: ARHGAP35 (GRF1, GRLF1, KIAA1722, P190A, p190ARHOGAP)
Find proteins for Q9NRY4 (Homo sapiens)
Go to Gene View: ARHGAP35
Go to UniProtKB:  Q9NRY4
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
UNX
Query on UNX

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A
UNKNOWN ATOM OR ION
X
*
 Ligand Interaction
MG
Query on MG

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Download CCD File 
A
MAGNESIUM ION
Mg
JLVVSXFLKOJNIY-UHFFFAOYSA-N
 Ligand Interaction
GNP
Query on GNP

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Download CCD File 
A
PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER
C10 H17 N6 O13 P3
UQABYHGXWYXDTK-UUOKFMHZSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.247 
  • R-Value Work: 0.205 
  • Space Group: I 4
Unit Cell:
Length (Å)Angle (°)
a = 108.959α = 90.00
b = 108.959β = 90.00
c = 51.319γ = 90.00
Software Package:
Software NamePurpose
PDB_EXTRACTdata extraction
RESOLVEphasing
REFMACrefinement
SCALEPACKdata scaling
ADSCdata collection
DENZOdata reduction
SOLVEphasing
MAR345data collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-02-12
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-10-25
    Type: Refinement description