Binding of aminoglycoside antibiotics to the duplex form of the HIV-1 genomic RNA dimerization initiation site.
Freisz, S., Lang, K., Micura, R., Dumas, P., Ennifar, E.(2008) Angew Chem Int Ed Engl 47: 4110-4113
Experimental Data Snapshot
(2008) Angew Chem Int Ed Engl 47: 4110-4113
Ligands 3 Unique | |||||
---|---|---|---|---|---|
ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
PAR Query on PAR | C [auth A], F [auth B] | PAROMOMYCIN C23 H45 N5 O14 UOZODPSAJZTQNH-LSWIJEOBSA-N | Ligand Interaction | ||
K Query on K | D [auth A], G [auth B], H [auth B], J [auth B] | POTASSIUM ION K NPYPAHLBTDXSSS-UHFFFAOYSA-N | Ligand Interaction | ||
CL Query on CL | E [auth A], I [auth B] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M | Ligand Interaction |
Length ( Å ) | Angle ( ˚ ) |
---|---|
a = 30.818 | α = 90 |
b = 95.703 | β = 90 |
c = 47.856 | γ = 90 |
Software Name | Purpose |
---|---|
CNS | refinement |
DNA | data collection |
DENZO | data reduction |
SCALEPACK | data scaling |
CNS | phasing |