3B7X | pdb_00003b7x

Crystal structure of human FK506-Binding Protein 6

• PDB DOI: https://doi.org/10.2210/pdb3B7X/pdb

• Classification: ISOMERASE
• Organism(s): Homo sapiens
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2007-10-31 Released: 2007-11-27 
• Deposition Author(s): Walker, J.R., Davis, T., Butler-Cole, C., Paramanathan, R., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free: 
  0.282 (Depositor), 0.290 (DCC) 
• R-Value Work: 
  0.256 (Depositor), 0.250 (DCC) 
• R-Value Observed: 
  0.258 (Depositor) 

Starting Model: experimental

Literature

Human FK506-Binding Protein 6.

Walker, J.R., Davis, T., Butler-Cole, C., Paramanathan, R., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 15.07 kDa 
• Atom Count: 977 
• Modeled Residue Count: 117 
• Deposited Residue Count: 134 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
FK506-binding protein 6	A	134	Homo sapiens	Mutation(s): 0  Gene Names: FKBP6, FKBP36 EC: 5.2.1.8
UniProt & NIH Common Fund Data Resources
Find proteins for O75344 (Homo sapiens) Explore O75344  Go to UniProtKB:  O75344
PHAROS:  O75344 GTEx:  ENSG00000077800

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.10 Å
• R-Value Free:  0.282 (Depositor), 0.290 (DCC) 
• R-Value Work:  0.256 (Depositor), 0.250 (DCC) 
• R-Value Observed: 0.258 (Depositor) 

Space Group: I 4₁ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 55.059	α = 90
b = 55.059	β = 90
c = 229.965	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement
HKL-2000	data collection
HKL-2000	data reduction
HKL-2000	data scaling
PHASER	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2007-11-27 
Deposition Author(s): Walker, J.R., Davis, T., Butler-Cole, C., Paramanathan, R., Weigelt, J., Arrowsmith, C.H., Edwards, A.M., Bochkarev, A., Dhe-Paganon, S., Structural Genomics Consortium (SGC)

Revision History  

• Version 1.0: 2007-11-27
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2023-08-30
  Changes: Data collection, Database references, Refinement description