The crystal structure of the tertiary complex of CMP kinase with a phosphoryl group acceptor and a donor from Thermus thermophilus HB8
Mega, R., Nakagawa, N., Kuramitsu, S., Masui, R.To be published.
Experimental Data Snapshot
Starting Model: experimental
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Entity ID: 1 | |||||
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Molecule | Chains | Sequence Length | Organism | Details | Image |
Cytidylate kinase | 208 | Thermus thermophilus HB8 | Mutation(s): 0  Gene Names: TTHA0458 EC: 2.7.4.14 | ||
UniProt | |||||
Find proteins for Q5SL35 (Thermus thermophilus (strain ATCC 27634 / DSM 579 / HB8)) Go to UniProtKB:  Q5SL35 | |||||
Sequence AnnotationsExpand | |||||
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Ligands 3 Unique | |||||
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ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
ADP Query on ADP | C [auth A] | ADENOSINE-5'-DIPHOSPHATE C10 H15 N5 O10 P2 XTWYTFMLZFPYCI-KQYNXXCUSA-N | |||
CDP Query on CDP | B [auth A] | CYTIDINE-5'-DIPHOSPHATE C9 H15 N3 O11 P2 ZWIADYZPOWUWEW-XVFCMESISA-N | |||
GD Query on GD | D [auth A] | GADOLINIUM ATOM Gd UIWYJDYFSGRHKR-UHFFFAOYSA-N |
Length ( Å ) | Angle ( ˚ ) |
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a = 62.206 | α = 90 |
b = 62.206 | β = 90 |
c = 110.951 | γ = 120 |
Software Name | Purpose |
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HKL-2000 | data collection |
ARP/wARP | model building |
CNS | refinement |
HKL-2000 | data reduction |
HKL-2000 | data scaling |