Download MendeleyCrystal structure of NADH-dependent quinuclidinone reductase from Agrobacterium tumefaciens
Miyakawa, T., Kataoka, M., Takeshita, D., Nomoto, F., Nagata, K., Shimizu, S., Tanokura, M.To be published.
3AK4
Crystal structure of NADH-dependent quinuclidinone reductase from agrobacterium tumefaciens
- PDB DOI: 10.2210/pdb3AK4/pdb
- Classification: OXIDOREDUCTASE
- Organism(s): Agrobacterium tumefaciens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2010-07-07 Released: 2011-07-13
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.191
- R-Value Work: 0.149
- R-Value Observed: 0.151
This is version 1.0 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| NADH-dependent quinuclidinone reductase | A, B, C, D | 263 | Agrobacterium tumefaciens | Mutation(s): 0 |  |
UniProt | |||||
Find proteins for G1K3P5 (Rhizobium radiobacter) Explore G1K3P5 Go to UniProtKB: G1K3P5 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | G1K3P5 | ||||
Protein Feature ViewExpand | |||||
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Small Molecules
| Ligands 1 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| NAD Query on NAD | E [auth A], F [auth B], G [auth C], H [auth D] | NICOTINAMIDE-ADENINE-DINUCLEOTIDE C21 H27 N7 O14 P2 BAWFJGJZGIEFAR-NNYOXOHSSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.00 Å
- R-Value Free: 0.191
- R-Value Work: 0.149
- R-Value Observed: 0.151
- Space Group: P 1 21 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 62.55 | α = 90 |
| b = 127.3 | β = 110.4 |
| c = 62.48 | γ = 90 |
| Software Name | Purpose |
|---|---|
| CrystalClear | data collection |
| MOLREP | phasing |
| REFMAC | refinement |
| XDS | data reduction |
| XSCALE | data scaling |
Entry History
Deposition Data
- Released Date: 2011-07-13 Deposition Author(s): Miyakawa, T., Kataoka, M., Takeshita, D., Nomoto, F., Nagata, K., Shimizu, S., Tanokura, M.
Revision History (Full details and data files)
- Version 1.0: 2011-07-13
Type: Initial release
