2YUB | pdb_00002yub

Solution structure of the PDZ domain from mouse LIM domain kinase

PDB DOI: https://doi.org/10.2210/pdb2YUB/pdb
BMRB: 11248

Classification: TRANSFERASE
Organism(s): Mus musculus
Mutation(s): No

Deposited: 2007-04-06 Released: 2008-04-08
Deposition Author(s): Hayashi, F., Suetake, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Experimental Data Snapshot

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations, target function

wwPDB Validation 3D Report Full Report

Validation slider image for 2YUB

This is version 1.3 of the entry. See complete history.

Literature

Solution structure of the PDZ domain from mouse LIM domain kinase

Hayashi, F., Suetake, T., Yokoyama, S.

To be published.

Macromolecule Content

Total Structure Weight: 12.8 kDa
Atom Count: 895
Modeled Residue Count: 118
Deposited Residue Count: 118
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
LIM domain kinase 2	A	118	Mus musculus	Mutation(s): 0 Gene Names: Limk2 EC: 2.7.11.1
UniProt & NIH Common Fund Data Resources
Find proteins for O54785 (Mus musculus) Explore O54785 Go to UniProtKB: O54785
IMPC: MGI:1197517
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	O54785
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: SOLUTION NMR
Conformers Calculated: 100
Conformers Submitted: 20
Selection Criteria: structures with the least restraint violations, target function

Structure Validation

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Entry History

Deposition Data

Released Date: 2008-04-08

Deposition Author(s):

RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History (Full details and data files)

Version 1.0: 2008-04-08
Type: Initial release
Version 1.1: 2011-07-13
Changes: Version format compliance
Version 1.2: 2022-03-16
Changes: Database references, Derived calculations
Version 1.3: 2024-05-29
Changes: Data collection

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.