2YPD

Crystal structure of the Jumonji domain of human Jumonji domain containing 1C protein


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.240 
  • R-Value Work: 0.215 
  • R-Value Observed: 0.216 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal Structure of the Jumonji Domain of Human Jumonji Domain Containing 1C Protein

Vollmar, M.Johansson, C.Krojer, T.Strain-Damerell, C.Froese, S.Williams, E.Coutandin, D.von Delft, F.Weigelt, J.Arrowsmith, C.H.Bountra, C.Edwards, A.Oppermann, U.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
PROBABLE JMJC DOMAIN-CONTAINING HISTONE DEMETHYLATION PROT EIN 2CA, B392Homo sapiensMutation(s): 0 
Gene Names: JMJD1CJHDM2CKIAA1380TRIP8
EC: 1.14.11
UniProt & NIH Common Fund Data Resources
Find proteins for Q15652 (Homo sapiens)
Explore Q15652 
Go to UniProtKB:  Q15652
PHAROS:  Q15652
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.240 
  • R-Value Work: 0.215 
  • R-Value Observed: 0.216 
  • Space Group: P 2 21 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 45.718α = 90
b = 112.206β = 90
c = 165.173γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
autoSHARPphasing

Structure Validation

View Full Validation Report




Entry History 

Revision History  (Full details and data files)

  • Version 1.0: 2012-12-12
    Type: Initial release
  • Version 1.1: 2014-09-17
    Changes: Atomic model, Derived calculations, Non-polymer description, Other, Source and taxonomy
  • Version 1.2: 2018-01-24
    Changes: Advisory, Database references