2RHO

Synthetic Gene Encoded Bacillus Subtilis FtsZ NCS Dimer with Bound GDP and GTP-gamma-S


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.270 
  • R-Value Work: 0.227 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Combined protein construct and synthetic gene engineering for heterologous protein expression and crystallization using Gene Composer.

Raymond, A.Lovell, S.Lorimer, D.Walchli, J.Mixon, M.Wallace, E.Thompkins, K.Archer, K.Burgin, A.Stewart, L.

(2009) BMC Biotechnol. 9: 37-37

  • DOI: 10.1186/1472-6750-9-37
  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • With the goal of improving yield and success rates of heterologous protein production for structural studies we have developed the database and algorithm software package Gene Composer. This freely available electronic tool facilitates the informatio ...

    With the goal of improving yield and success rates of heterologous protein production for structural studies we have developed the database and algorithm software package Gene Composer. This freely available electronic tool facilitates the information-rich design of protein constructs and their engineered synthetic gene sequences, as detailed in the accompanying manuscript.


    Organizational Affiliation

    deCODE biostructures Inc, 7869 NE Day Road West, Bainbridge Island, WA 98110, USA. araymond@decode.com




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Cell Division Protein ftsZ
A, B
325Bacillus subtilis (strain 168)Mutation(s): 0 
Gene Names: ftsZ
Find proteins for P17865 (Bacillus subtilis (strain 168))
Go to UniProtKB:  P17865
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
GDP
Query on GDP

Download SDF File 
Download CCD File 
B
GUANOSINE-5'-DIPHOSPHATE
C10 H15 N5 O11 P2
QGWNDRXFNXRZMB-UUOKFMHZSA-N
 Ligand Interaction
GSP
Query on GSP

Download SDF File 
Download CCD File 
A
5'-GUANOSINE-DIPHOSPHATE-MONOTHIOPHOSPHATE
C10 H16 N5 O13 P3 S
XOFLBQFBSOEHOG-UUOKFMHZSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.45 Å
  • R-Value Free: 0.270 
  • R-Value Work: 0.227 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 82.295α = 90.00
b = 97.164β = 90.00
c = 134.719γ = 90.00
Software Package:
Software NamePurpose
MOLREPphasing
SBC-Collectdata collection
DENZOdata reduction
REFMACrefinement
SCALEPACKdata scaling
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-10-21
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-10-25
    Type: Refinement description