2QHS

Structural Basis of Octanoic Acid Recognition by Lipoate-Protein Ligase B


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.185 
  • R-Value Observed: 0.187 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Structural basis of octanoic acid recognition by lipoate-protein ligase B

Kim, D.J.Lee, S.J.Kim, H.S.Kim, K.H.Lee, H.H.Yoon, H.J.Suh, S.W.

(2008) Proteins 70: 1620-1625


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
LipoyltransferaseA237Thermus thermophilus HB8Mutation(s): 0 
Gene Names: TTC 1746lipBTTHA0240
EC: 2.3.1 (PDB Primary Data), 2.3.1.181 (UniProt)
Find proteins for Q5SLQ3 (Thermus thermophilus (strain HB8 / ATCC 27634 / DSM 579))
Explore Q5SLQ3 
Go to UniProtKB:  Q5SLQ3
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
OCA
Query on OCA

Download Ideal Coordinates CCD File 
B [auth A]OCTANOIC ACID (CAPRYLIC ACID)
C8 H16 O2
WWZKQHOCKIZLMA-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.50 Å
  • R-Value Free: 0.208 
  • R-Value Work: 0.185 
  • R-Value Observed: 0.187 
  • Space Group: P 41 21 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 63.717α = 90
b = 63.717β = 90
c = 114.024γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
HKL-2000data collection
HKL-2000data reduction
HKL-2000data scaling
SOLVEphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2008-02-26
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Source and taxonomy, Version format compliance