Download MendeleyThe crystal structure of the human RAC3 in complex with the CRIB domain of human p21-activated kinase 4 (PAK4)
Ugochukwu, E., Yang, X., Elkins, J.M., Burgess-Brown, N., Knapp, S., Doyle, D.A.To be published.
2OV2
The crystal structure of the human RAC3 in complex with the CRIB domain of human p21-activated kinase 4 (PAK4)
- PDB DOI: 10.2210/pdb2OV2/pdb
- Classification: PROTEIN BINDING/TRANSFERASE
- Organism(s): Homo sapiens
- Expression System: Escherichia coli
- Mutation(s): No
- Deposited: 2007-02-12 Released: 2007-03-13
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.225
- R-Value Work: 0.172
- R-Value Observed: 0.174
This is version 1.3 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Ras-related C3 botulinum toxin substrate 3 | 179 | Homo sapiens | Mutation(s): 0 Gene Names: RAC3 EC: 3.6.5.2 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for P60763 (Homo sapiens) Explore P60763 Go to UniProtKB: P60763 | |||||
PHAROS: P60763 GTEx: ENSG00000169750 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P60763 | ||||
Protein Feature ViewExpand | |||||
| |||||
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 2 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| Serine/threonine-protein kinase PAK 4 | 35 | Homo sapiens | Mutation(s): 0 Gene Names: PAK4, KIAA1142 EC: 2.7.11.1 |  | |
UniProt & NIH Common Fund Data Resources | |||||
Find proteins for O96013 (Homo sapiens) Explore O96013 Go to UniProtKB: O96013 | |||||
PHAROS: O96013 GTEx: ENSG00000130669 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | O96013 | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GCP Query on GCP | CA [auth C], FA [auth G], HA [auth D], LA [auth E], NA [auth H], | PHOSPHOMETHYLPHOSPHONIC ACID GUANYLATE ESTER C11 H18 N5 O13 P3 PHBDHXOBFUBCJD-KQYNXXCUSA-N |  | Ligand Interaction | |
| EDO Query on EDO | DA [auth C], IA [auth D], W [auth F] | 1,2-ETHANEDIOL C2 H6 O2 LYCAIKOWRPUZTN-UHFFFAOYSA-N |  | Ligand Interaction | |
| CL Query on CL | BA [auth C], KA [auth E], OA [auth N], PA [auth O], QA [auth P], | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | Ligand Interaction | |
| MG Query on MG | AA [auth C], EA [auth G], GA [auth D], JA [auth E], MA [auth H], | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 2.10 Å
- R-Value Free: 0.225
- R-Value Work: 0.172
- R-Value Observed: 0.174
- Space Group: P 1
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 50.843 | α = 88.58 |
| b = 73.859 | β = 87.76 |
| c = 133.84 | γ = 70.64 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| MAR345 | data collection |
| MOSFLM | data reduction |
| CCP4 | data scaling |
| PHASER | phasing |
Entry History
Deposition Data
- Deposited Date: 2007-02-12
- Released Date: 2007-03-13 Deposition Author(s): Ugochukwu, E., Yang, X., Elkins, J.M., Burgess-Brown, N., Bunkoczi, G., Debreczeni, J.E.D., Sundstrom, M., Arrowsmith, C.H., Weigelt, J., Edwards, A., von Delft, F., Knapp, S., Doyle, D.A., Structural Genomics Consortium (SGC)
Revision History (Full details and data files)
- Version 1.0: 2007-03-13
Type: Initial release - Version 1.1: 2008-05-01
Changes: Version format compliance - Version 1.2: 2011-07-13
Changes: Advisory, Version format compliance - Version 1.3: 2017-10-18
Changes: Refinement description
