2MXZ

Bacteriophage T5 l-alanoyl-d-glutamate peptidase comlpex with Zn2+ (Endo T5-ZN2+)

• PDB DOI: https://doi.org/10.2210/pdb2MXZ/pdb
• BMRB: 25437

• Classification: HYDROLASE
• Organism(s): Tequintavirus T5
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2015-01-19 Released: 2015-02-11 
• Deposition Author(s): Prokhorov, D.A., Mikoulinskaia, G.V., Kutyshenko, V.P.

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Literature

High-resolution NMR structure of a Zn2+-containing form of the bacteriophage T5 L-alanyl-D-glutamate peptidase

Prokhorov, D.A., Mikoulinskaia, G.V., Molochkov, N.V., Uversky, V.N., Kutyshenko, V.P.

(2015) RSC Adv 5: 41041-41049

• DOI: https://doi.org/10.1039/C5RA05993C

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 15.35 kDa 
• Atom Count: 1,081 
• Modelled Residue Count: 137 
• Deposited Residue Count: 137 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
L-alanyl-D-glutamate peptidase	A	137	Tequintavirus T5	Mutation(s): 0  Gene Names: lys, T5.040, T5p039 EC: 3.4.24
UniProt
Find proteins for Q6QGP7 (Escherichia phage T5) Explore Q6QGP7  Go to UniProtKB:  Q6QGP7

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2015-02-11 
Deposition Author(s): Prokhorov, D.A., Mikoulinskaia, G.V., Kutyshenko, V.P.

Revision History  

• Version 1.0: 2015-02-11
  Type: Initial release
  
• Version 1.1: 2015-08-05
  Changes: Database references
• Version 1.2: 2023-06-14
  Changes: Data collection, Database references, Derived calculations, Other
• Version 1.3: 2024-05-15
  Changes: Data collection, Database references