2KZU

DAXX helical bundle (DHB) domain / Rassf1C complex


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 120 
  • Conformers Submitted: 25 
  • Selection Criteria: structures with the lowest energy 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structural Characterization of the DAXX N-Terminal Helical Bundle Domain and Its Complex with Rassf1C.

Escobar-Cabrera, E.Lau, D.K.Giovinazzi, S.Ishov, A.M.McIntosh, L.P.

(2010) Structure 18: 1642-1653

  • DOI: 10.1016/j.str.2010.09.016
  • Structures With Same Primary Citation

  • PubMed Abstract: 
  • DAXX is a scaffold protein with diverse roles including transcription and cell cycle regulation. Using NMR spectroscopy, we demonstrate that the C-terminal half of DAXX is intrinsically disordered, whereas a folded domain is present near its N termin ...

    DAXX is a scaffold protein with diverse roles including transcription and cell cycle regulation. Using NMR spectroscopy, we demonstrate that the C-terminal half of DAXX is intrinsically disordered, whereas a folded domain is present near its N terminus. This domain forms a left-handed four-helix bundle (H1, H2, H4, H5). However, due to a crossover helix (H3), this topology differs from that of the Sin3 PAH domain, which to date has been used as a model for DAXX. The N-terminal residues of the tumor suppressor Rassf1C fold into an amphipathic α helix upon binding this DAXX domain via a shallow cleft along the flexible helices H2 and H5 (K(D) ∼60 μM). Based on a proposed DAXX recognition motif as hydrophobic residues preceded by negatively charged groups, we found that peptide models of p53 and Mdm2 also bound the helical bundle. These data provide a structural foundation for understanding the diverse functions of DAXX.


    Organizational Affiliation

    Department of Biochemistry and Molecular Biology, University of British Columbia, Vancouver, BC V6T1Z3, Canada.



Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Death-associated protein 6
A
94Homo sapiensMutation(s): 0 
Gene Names: DAXXDADB-159G18.9-007DAMC-227D19.15-007DAQB-126H3.2-007XXbac-BCX165D10.3-007XXbac-BPG185D15.6-007
Find proteins for Q4VX54 (Homo sapiens)
Go to UniProtKB:  Q4VX54
NIH Common Fund Data Resources
  • Find similar proteins by: Sequence   |   Structure
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
Ras association (RalGDS/AF-6) domain family 1
B
18Homo sapiensMutation(s): 0 
Gene Names: RASSF1hCG_17462RDA32
Find proteins for Q9NS23 (Homo sapiens)
Go to UniProtKB:  Q9NS23
NIH Common Fund Data Resources
PHAROS  Q9NS23
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 120 
  • Conformers Submitted: 25 
  • Selection Criteria: structures with the lowest energy 
  • OLDERADO: 2KZU Olderado

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-12-15
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance
  • Version 1.2: 2020-02-05
    Changes: Database references, Other