2ICU

Crystal Structure of Hypothetical Protein YedK From Escherichia coli


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.60 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.173 
  • R-Value Observed: 0.174 

wwPDB Validation   3D Report Full Report


This is version 1.4 of the entry. See complete history


Literature

Crystal Structure of Hypothetical Protein YedK From Escherichia coli

Chen, L.Liu, Z.J.Li, Y.Zhao, M.Rose, J.Ebihara, A.Yokoyama, S.Wang, B.C.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
Hypothetical protein yedK AB229Escherichia coli K-12Mutation(s): 4 
Gene Names: yedKyedGb1931JW1916
EC: 3.4
Find proteins for P76318 (Escherichia coli (strain K12))
Explore P76318 
Go to UniProtKB:  P76318
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A,BL-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.60 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.173 
  • R-Value Observed: 0.174 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 46.687α = 90
b = 67.366β = 98.29
c = 75.125γ = 90
Software Package:
Software NamePurpose
SCA2STRUCTUREmodel building
REFMACrefinement
SERGUIdata collection
HKL-2000data reduction
SCALEPACKdata scaling
SCA2STRUCTUREphasing

Structure Validation

View Full Validation Report



Entry History 

Revision History 

  • Version 1.0: 2006-11-07
    Type: Initial release
  • Version 1.1: 2008-05-01
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Source and taxonomy, Version format compliance
  • Version 1.3: 2017-09-13
    Changes: Refinement description
  • Version 1.4: 2018-01-24
    Changes: Structure summary