2ICU

Crystal Structure of Hypothetical Protein YedK From Escherichia coli


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.173 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history

Literature

Crystal Structure of Hypothetical Protein YedK From Escherichia coli

Chen, L.Liu, Z.J.Li, Y.Zhao, M.Rose, J.Ebihara, A.Yokoyama, S.Wang, B.C.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Hypothetical protein yedK
A, B
229Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: yedK (yedG)
EC: 3.4.-.-
Find proteins for P76318 (Escherichia coli (strain K12))
Go to UniProtKB:  P76318
Small Molecules
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.6 Å
  • R-Value Free: 0.203 
  • R-Value Work: 0.173 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 46.687α = 90.00
b = 67.366β = 98.29
c = 75.125γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
SCA2STRUCTUREphasing
SCA2STRUCTUREmodel building
HKL-2000data reduction
SERGUIdata collection
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2006-11-07
    Type: Initial release
  • Version 1.1: 2008-05-01
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Source and taxonomy, Version format compliance
  • Version 1.3: 2017-09-13
    Type: Refinement description
  • Version 1.4: 2018-01-24
    Type: Structure summary