2DTC

Crystal structure of MS0666

• PDB DOI:  https://doi.org/10.2210/pdb2DTC/pdb

• Classification: PROTEIN BINDING
• Organism(s): Mus musculus
• Mutation(s): Yes 
• Membrane Protein: Yes  OPM


• Deposited: 2006-07-12 Released: 2007-01-12 
• Deposition Author(s): Wang, H., Kishishita, S., Murayama, K., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 1.70 Å
• R-Value Free: 0.234 
• R-Value Work: 0.192 
• R-Value Observed: 0.192 

Literature

Crystal structure of MS0666

Wang, H., Kishishita, S., Murayama, K., Terada, T., Shirouzu, M., Yokoyama, S.

To be published.

Biological Assembly 1  

Global Symmetry: Cyclic - C2  (Explore in 3D)
Global Stoichiometry: Homo 2-mer - A2 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content

• Total Structure Weight: 29.18 kDa 
• Atom Count: 2,161 
• Modelled Residue Count: 231 
• Deposited Residue Count: 252 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
RAL GUANINE NUCLEOTIDE EXCHANGE FACTOR RALGPS1A	A, B	126	Mus musculus	Mutation(s): 3  Gene Names: Ralgps1, Kiaa0351, Ralgef2, Ralgps1a Membrane Entity: Yes
UniProt & NIH Common Fund Data Resources
Find proteins for A2AR50 (Mus musculus) Explore A2AR50  Go to UniProtKB:  A2AR50
IMPC:  MGI:1922008

Small Molecules

Ligands 0 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram

Modified Residues  1 Unique
ID	Chains	Type	Formula	2D Diagram	Parent
MSE	A, B	L-PEPTIDE LINKING	C5 H11 N O2 Se		MET

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 1.70 Å
• R-Value Free: 0.234 
• R-Value Work: 0.192 
• R-Value Observed: 0.192 
• Space Group: P 1 2₁ 1

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 43.68	α = 90
b = 61.077	β = 104.72
c = 43.939	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
HKL-2000	data reduction
HKL-2000	data scaling
SOLVE	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2007-01-12 
Deposition Author(s): Wang, H., Kishishita, S., Murayama, K., Terada, T., Shirouzu, M., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2007-01-12
  Type: Initial release
  
• Version 1.1: 2008-04-30
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance