2ZPM

Crystal structure analysis of PDZ domain B


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.98 Å
  • R-Value Free: 0.180 
  • R-Value Work: 0.150 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal Structure analysis of PDZ-domain B

Inaba, K.Suzuki, M.Maegawa, K.Akiyama, Y.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Regulator of sigma E protease
A
91Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: rseP (ecfE, yaeL)
EC: 3.4.24.-
Find proteins for P0AEH1 (Escherichia coli (strain K12))
Go to UniProtKB:  P0AEH1
Small Molecules
Modified Residues  2 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
MLY
Query on MLY
A
L-PEPTIDE LINKINGC8 H18 N2 O2LYS
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 0.98 Å
  • R-Value Free: 0.180 
  • R-Value Work: 0.150 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 70.141α = 90.00
b = 26.867β = 112.12
c = 42.789γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
SCALAdata scaling
HKL-2000data reduction
HKL-2000data scaling
SHELXCDphasing
SHELXEmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2008-07-17 
  • Released Date: 2008-10-21 
  • Deposition Author(s): Inaba, K., Suzuki, M.

Revision History 

  • Version 1.0: 2008-10-21
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-10-11
    Type: Refinement description