2ZE4

Crystal structure of phospholipase D from streptomyces antibioticus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.171 
  • R-Value Work: 0.121 

wwPDB Validation 3D Report Full Report


This is version 1.1 of the entry. See complete history

Literature

Crystal structure of phospholipase D from streptomyces antibioticus

Suzuki, A.Kakuno, K.Saito, R.Iwasaki, Y.Yamane, T.Yamane, T.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
Phospholipase D
A
509Streptomyces antibioticusMutation(s): 0 
EC: 3.1.4.4
Find proteins for Q53728 (Streptomyces antibioticus)
Go to UniProtKB:  Q53728
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MES
Query on MES

Download SDF File 
Download CCD File 
A
2-(N-MORPHOLINO)-ETHANESULFONIC ACID
C6 H13 N O4 S
SXGZJKUKBWWHRA-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.171 
  • R-Value Work: 0.121 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 61.004α = 90.00
b = 85.008β = 90.00
c = 99.343γ = 90.00
Software Package:
Software NamePurpose
DENZOdata reduction
REFMACrefinement
MLPHAREphasing
Weissenbergdata collection
SCALEPACKdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-12-25
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance