2ZBB

P43 crystal of DctBp


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.272 
  • R-Value Work: 0.209 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

crystal structures of sensory histidine kinase DctBp

Zhou, Y.F.Nan, B.Y.Liu, X.Nan, J.Liang, Y.H.Panjikar, S.Ma, Q.J.Wang, Y.P.Su, X.-D.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
C4-dicarboxylate transport sensor protein dctB
A, B, C, D
305Rhizobium meliloti (strain 1021)Mutation(s): 0 
Gene Names: dctB
EC: 2.7.13.3
Find proteins for P13633 (Rhizobium meliloti (strain 1021))
Go to UniProtKB:  P13633
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MLA
Query on MLA

Download SDF File 
Download CCD File 
A, B, C, D
MALONIC ACID
DICARBOXYLIC ACID C3; PROPANEDIOLIC ACID; METHANEDICARBOXYLIC ACID
C3 H4 O4
OFOBLEOULBTSOW-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.272 
  • R-Value Work: 0.209 
  • Space Group: P 43
Unit Cell:
Length (Å)Angle (°)
a = 70.360α = 90.00
b = 70.360β = 90.00
c = 226.920γ = 90.00
Software Package:
Software NamePurpose
SCALEPACKdata scaling
DENZOdata reduction
REFMACrefinement
MOLREPphasing
PDB_EXTRACTdata extraction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-11-18
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.2: 2015-04-29
    Type: Non-polymer description
  • Version 1.3: 2017-10-11
    Type: Refinement description