2Z6V | pdb_00002z6v

Crystal structure of sulfotransferase STF9 from Mycobacterium avium

• PDB DOI: https://doi.org/10.2210/pdb2Z6V/pdb

• Classification: UNKNOWN FUNCTION
• Organism(s): Mycobacterium avium
• Expression System: Escherichia coli
• Mutation(s): No 


• Deposited: 2007-08-09 Released: 2008-09-09 
• Deposition Author(s): Hassain, M.M., Moriizumi, Y., Tanaka, S., Kimura, M., Kakuta, Y.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.60 Å
• R-Value Free: 
  0.235 (Depositor), 0.230 (DCC) 
• R-Value Work: 
  0.199 (Depositor), 0.200 (DCC) 
• R-Value Observed: 
  0.199 (Depositor) 

Literature

Crystal structure of sulfotransferase STF9 from Mycobacterium avium

Hassain, M.M., Moriizumi, Y., Tanaka, S., Kimura, M., Kakuta, Y.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PISA (software)

Macromolecule Content 

• Total Structure Weight: 48.47 kDa 
• Atom Count: 3,400 
• Modeled Residue Count: 392 
• Deposited Residue Count: 414 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Putative uncharacterized protein	A	414	Mycobacterium avium	Mutation(s): 0
UniProt
Find proteins for A0A0H2ZS19 (Mycobacterium avium (strain 104)) Explore A0A0H2ZS19  Go to UniProtKB:  A0A0H2ZS19

Small Molecules

Ligands 2 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
PLM	C [auth A]	PALMITIC ACID C16 H32 O2 IPCSVZSSVZVIGE-UHFFFAOYSA-N
SO4	B [auth A]	SULFATE ION O4 S QAOWNCQODCNURD-UHFFFAOYSA-L

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.60 Å
• R-Value Free:  0.235 (Depositor), 0.230 (DCC) 
• R-Value Work:  0.199 (Depositor), 0.200 (DCC) 
• R-Value Observed: 0.199 (Depositor) 

Space Group: I 4₁ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 229.517	α = 90
b = 229.517	β = 90
c = 56.891	γ = 90

Software Package:

Software Name	Purpose
CNS	refinement
BBS	data collection
HKL-2000	data reduction
HKL-2000	data scaling
MOLREP	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2008-09-09 
Deposition Author(s): Hassain, M.M., Moriizumi, Y., Tanaka, S., Kimura, M., Kakuta, Y.

Revision History  

• Version 1.0: 2008-09-09
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2024-03-13
  Changes: Data collection, Database references, Derived calculations