2YSA

Solution structure of the zinc finger CCHC domain from the human retinoblastoma-binding protein 6 (Retinoblastoma-binding Q protein 1, RBQ-1)

• PDB DOI: https://doi.org/10.2210/pdb2YSA/pdb

• Classification: METAL BINDING PROTEIN
• Organism(s): Homo sapiens
• Mutation(s): No 


• Deposited: 2007-04-03 Released: 2007-10-09 
• Deposition Author(s): Ohnishi, S., Sato, M., Tochio, N., Koshiba, S., Harada, T., Watanabe, S., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

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Experimental Data Snapshot

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, target function 

Literature

Solution structure of the zinc finger CCHC domain from the human retinoblastoma-binding protein 6 (Retinoblastoma-binding Q protein 1, RBQ-1)

Ohnishi, S., Sato, M., Tochio, N., Koshiba, S., Harada, T., Watanabe, S., Kigawa, T., Yokoyama, S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors.

Macromolecule Content

• Total Structure Weight: 6.05 kDa 
• Atom Count: 416 
• Modelled Residue Count: 55 
• Deposited Residue Count: 55 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
Retinoblastoma-binding protein 6	A	55	Homo sapiens	Mutation(s): 0  Gene Names: RBBP6 EC: 2.3.2.27
UniProt & NIH Common Fund Data Resources
Find proteins for Q7Z6E9 (Homo sapiens) Explore Q7Z6E9  Go to UniProtKB:  Q7Z6E9
PHAROS:  Q7Z6E9 GTEx:  ENSG00000122257

Small Molecules

Ligands 1 Unique
ID	Chains	Name / Formula / InChI Key	2D Diagram
ZN	B [auth A]	ZINC ION Zn PTFCDOFLOPIGGS-UHFFFAOYSA-N

Experimental Data & Validation

Experimental Data

• Method: SOLUTION NMR
• Conformers Calculated: 100 
• Conformers Submitted: 20 
• Selection Criteria: structures with the least restraint violations, target function 

Structure Validation

Entry History 

Deposition Data

• Released Date: 2007-10-09 
Deposition Author(s): Ohnishi, S., Sato, M., Tochio, N., Koshiba, S., Harada, T., Watanabe, S., Kigawa, T., Yokoyama, S., RIKEN Structural Genomics/Proteomics Initiative (RSGI)

Revision History  

• Version 1.0: 2007-10-09
  Type: Initial release
  
• Version 1.1: 2011-07-13
  Changes: Version format compliance
• Version 1.2: 2022-03-16
  Changes: Data collection, Database references, Derived calculations
• Version 1.3: 2024-05-29
  Changes: Data collection