.png)
Take the User Survey
Download Mendeley
Download EndnoteInhibitor for the Main Protease of Coronavirus Hku4
Ma, Q., Xiao, Y., Hilgenfeld, R.To be published.
2YNA
Crystal structure of the main protease of coronavirus HKU4
- DOI: 10.2210/pdb2YNA/pdb
- Classification: HYDROLASE
- Organism(s): Bat coronavirus HKU4
- Expression System: Escherichia coli BL21(DE3)
- Deposited: 2012-10-13 Released: 2013-10-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.5 Å
- R-Value Free: 0.175
- R-Value Work: 0.157
wwPDB Validation 3D Report Full Report
This is version 1.0 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| 3C-LIKE PROTEINASE | A, B | 306 | Bat coronavirus HKU4 | Mutation(s): 0 |
Find proteins for P0C6T4 (Bat coronavirus HKU4) Go to UniProtKB: P0C6T4 | ||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | A, B | GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | Ligand Interaction | |
| IMD Query on IMD | A | IMIDAZOLE C3 H5 N2 RAXXELZNTBOGNW-UHFFFAOYSA-O |  | Ligand Interaction | |
| NI Query on NI | A, B | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.5 Å
- R-Value Free: 0.175
- R-Value Work: 0.157
- Space Group: P 31 2 1
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 79.624 | α = 90.00 |
| b = 79.624 | β = 90.00 |
| c = 178.370 | γ = 120.00 |
| Software Name | Purpose |
|---|---|
| AutoPROC | data reduction |
| BUSTER | refinement |
| SCALA | data scaling |
| XDS | data reduction |
| XDS | data scaling |
| AutoPROC | data scaling |
| MOLREP | phasing |
Entry History
Deposition Data
- Deposited Date: 2012-10-13
- Released Date: 2013-10-23
- Deposition Author(s): Ma, Q., Xiao, Y., Hilgenfeld, R.
Revision History
- Version 1.0: 2013-10-23
Type: Initial release
