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Download EndnoteInhibitor for the Main Protease of Coronavirus Hku4
Ma, Q., Xiao, Y., Hilgenfeld, R.To be published.
2YNA
Crystal structure of the main protease of coronavirus HKU4
- DOI: 10.2210/pdb2YNA/pdb
- Classification: HYDROLASE
- Organism(s): Bat coronavirus HKU4
- Expression System: Escherichia coli BL21(DE3)
- Deposited: 2012-10-13 Released: 2013-10-23
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.5 Å
- R-Value Free: 0.175
- R-Value Work: 0.157
wwPDB Validation 3D Report Full Report
This is version 1.1 of the entry. See complete history.
Literature
Macromolecules
Find similar proteins by: Sequence | Structure
Entity ID: 1 | ||||
|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details |
| 3C-LIKE PROTEINASE | A, B | 306 | Bat coronavirus HKU4 | Mutation(s): 0 |
Find proteins for P0C6T4 (Bat coronavirus HKU4) Go to UniProtKB: P0C6T4 | ||||
Small Molecules
| Ligands 3 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| GOL Query on GOL | A, B | GLYCEROL GLYCERIN; PROPANE-1,2,3-TRIOL C3 H8 O3 PEDCQBHIVMGVHV-UHFFFAOYSA-N |  | Ligand Interaction | |
| IMD Query on IMD | A | IMIDAZOLE C3 H5 N2 RAXXELZNTBOGNW-UHFFFAOYSA-O |  | Ligand Interaction | |
| NI Query on NI | A, B | NICKEL (II) ION Ni VEQPNABPJHWNSG-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.5 Å
- R-Value Free: 0.175
- R-Value Work: 0.157
- Space Group: P 31 2 1
Unit Cell:
| Length (Å) | Angle (°) |
|---|---|
| a = 79.624 | α = 90.00 |
| b = 79.624 | β = 90.00 |
| c = 178.370 | γ = 120.00 |
| Software Name | Purpose |
|---|---|
| XDS | data scaling |
| AutoPROC | data scaling |
| AutoPROC | data reduction |
| XDS | data reduction |
| MOLREP | phasing |
| BUSTER | refinement |
| SCALA | data scaling |
Entry History
Deposition Data
- Deposited Date: 2012-10-13
- Released Date: 2013-10-23
- Deposition Author(s): Ma, Q., Xiao, Y., Hilgenfeld, R.
