2YMS

Structure and assembly of a b-propeller with nine blades and a new conserved repetitive sequence motif


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.101 Å
  • R-Value Free: 0.239 
  • R-Value Work: 0.187 

wwPDB Validation 3D Report Full Report


This is version 1.0 of the entry. See complete history

Literature

Structure and Assembly of a B-Propeller with Nine Blades and a New Conserved Repetitive Sequence Motif

Albrecht, R.Zeth, K.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMB
A
130Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: bamB (yfgL)
Find proteins for P77774 (Escherichia coli (strain K12))
Go to UniProtKB:  P77774
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMB
B
74Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: bamB (yfgL)
Find proteins for P77774 (Escherichia coli (strain K12))
Go to UniProtKB:  P77774
Entity ID: 3
MoleculeChainsSequence LengthOrganismDetails
OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMB
C
75Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: bamB (yfgL)
Find proteins for P77774 (Escherichia coli (strain K12))
Go to UniProtKB:  P77774
Entity ID: 4
MoleculeChainsSequence LengthOrganismDetails
OUTER MEMBRANE PROTEIN ASSEMBLY FACTOR BAMB
D
74Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: bamB (yfgL)
Find proteins for P77774 (Escherichia coli (strain K12))
Go to UniProtKB:  P77774
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
NA
Query on NA

Download SDF File 
Download CCD File 
C
SODIUM ION
Na
FKNQFGJONOIPTF-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.101 Å
  • R-Value Free: 0.239 
  • R-Value Work: 0.187 
  • Space Group: C 1 2 1
Unit Cell:
Length (Å)Angle (°)
a = 88.570α = 90.00
b = 83.450β = 118.94
c = 57.370γ = 90.00
Software Package:
Software NamePurpose
XSCALEdata scaling
XDSdata reduction
MOLREPphasing
PHENIXrefinement

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

  • Deposited Date: 2012-10-10 
  • Released Date: 2013-10-30 
  • Deposition Author(s): Zeth, K., Albrecht, R.

Revision History 

  • Version 1.0: 2013-10-30
    Type: Initial release