2XYA

Non-covalent inhibtors of rhinovirus 3C protease.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.288 
  • R-Value Work: 0.227 
  • R-Value Observed: 0.230 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Non-Covalent Inhibitors of Rhinovirus 3C Protease.

Baxter, A.Chambers, M.Edfeldt, F.Edman, K.Freeman, A.Johansson, C.King, S.Morley, A.Petersen, J.Rawlins, P.Spadola, L.Thong, B.Poel, H.V.Williams, N.

(2011) Bioorg Med Chem Lett 21: 777

  • DOI: 10.1016/j.bmcl.2010.11.110
  • Primary Citation of Related Structures:  
    2XYA

  • PubMed Abstract: 
  • The first known non-covalent inhibitors of rhinovirus 3C protease (3CP) have been identified through fragment based screening and hit identification activities.


    Organizational Affiliation

    AstraZeneca, R&D Charnwood, Bakewell Road, Loughborough, Leicestershire LE11 5RH, UK.



Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
PICORNAIN 3CA182Human rhinovirus sp.Mutation(s): 0 
EC: 3.4.22.28 (PDB Primary Data), 3.4.22.29 (UniProt), 3.6.1.15 (UniProt), 2.7.7.48 (UniProt)
Find proteins for P04936 (Human rhinovirus 2)
Explore P04936 
Go to UniProtKB:  P04936
Protein Feature View
Expand
 ( Mouse scroll to zoom / Hold left click to move )
  • Reference Sequence
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
7L4
Query on 7L4

Download CCD File 
A
2-PHENYLQUINOLIN-4-OL
C15 H11 N O
JGABMVVOXLQCKZ-UHFFFAOYSA-N
 Ligand Interaction
External Ligand Annotations 
IDBinding Affinity (Sequence Identity %)
7L4Kd:  200000   nM  Binding MOAD
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.40 Å
  • R-Value Free: 0.288 
  • R-Value Work: 0.227 
  • R-Value Observed: 0.230 
  • Space Group: I 41 2 2
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 126.143α = 90
b = 126.143β = 90
c = 75.454γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2011-04-27
    Type: Initial release
  • Version 1.1: 2011-05-08
    Changes: Version format compliance
  • Version 1.2: 2011-07-13
    Changes: Version format compliance