2XV9

The solution structure of ABA-1A saturated with oleic acid


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 20 
  • Conformers Submitted: 20 
  • Selection Criteria: EXPERIMENTALLY DERIVED RESTRAINT ENERGY 

wwPDB Validation   3D Report Full Report


This is version 1.3 of the entry. See complete history


Literature

Solution structure of a repeated unit of the ABA-1 nematode polyprotein allergen of Ascaris reveals a novel fold and two discrete lipid-binding sites.

Meenan, N.A.Ball, G.Bromek, K.Uhrin, D.Cooper, A.Kennedy, M.W.Smith, B.O.

(2011) PLoS Negl Trop Dis 5: e1040-e1040

  • DOI: https://doi.org/10.1371/journal.pntd.0001040
  • Primary Citation of Related Structures:  
    2XV9

  • PubMed Abstract: 

    Nematode polyprotein allergens (NPAs) are an unusual class of lipid-binding proteins found only in nematodes. They are synthesized as large, tandemly repetitive polyproteins that are post-translationally cleaved into multiple copies of small lipid binding proteins with virtually identical fatty acid and retinol (Vitamin A)-binding characteristics. They are probably central to transport and distribution of small hydrophobic compounds between the tissues of nematodes, and may play key roles in nutrient scavenging, immunomodulation, and IgE antibody-based responses in infection. In some species the repeating units are diverse in amino acid sequence, but, in ascarid and filarial nematodes, many of the units are identical or near-identical. ABA-1A is the most common repeating unit of the NPA of Ascaris suum, and is closely similar to that of Ascaris lumbricoides, the large intestinal roundworm of humans. Immune responses to NPAs have been associated with naturally-acquired resistance to infection in humans, and the immune repertoire to them is under strict genetic control.


  • Organizational Affiliation

    School of Chemistry, University of Glasgow, Glasgow, Scotland, UK.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
ABA-1A1 REPEAT UNIT134Ascaris suumMutation(s): 0 
UniProt
Find proteins for Q06811 (Ascaris suum)
Explore Q06811 
Go to UniProtKB:  Q06811
Entity Groups  
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UniProt GroupQ06811
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 20 
  • Conformers Submitted: 20 
  • Selection Criteria: EXPERIMENTALLY DERIVED RESTRAINT ENERGY 

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2011-08-10
    Type: Initial release
  • Version 1.1: 2018-01-17
    Changes: Database references
  • Version 1.2: 2020-01-15
    Changes: Data collection, Other
  • Version 1.3: 2023-06-14
    Changes: Database references, Other