Download MendeleyTetr(D) in Complex with Oxytetracycline.
Dalm, D., Palm, G.J., Proft, J., Hinrichs, W.To be published.
2XPW
TetR(D) in complex with oxytetracycline and magnesium.
- PDB DOI: https://doi.org/10.2210/pdb2XPW/pdb
- Classification: TRANSCRIPTION
- Organism(s): Escherichia coli
- Expression System: Escherichia coli K-12
- Mutation(s): No
- Deposited: 2010-08-30 Released: 2011-09-07
Experimental Data Snapshot
- Method: X-RAY DIFFRACTION
- Resolution: 1.44 Å
- R-Value Free: 0.205
- R-Value Work: 0.177
- R-Value Observed: 0.178
This is version 1.1 of the entry. See complete history.
Literature
To be published.
Macromolecules
Find similar proteins by:
(by identity cutoff) | 3D Structure
Entity ID: 1 | |||||
|---|---|---|---|---|---|
| Molecule | Chains | Sequence Length | Organism | Details | Image |
| TETRACYCLINE REPRESSOR PROTEIN CLASS D | 207 | Escherichia coli | Mutation(s): 0 Gene Names: tetR |  | |
UniProt | |||||
Find proteins for P0ACT4 (Escherichia coli) Explore P0ACT4 Go to UniProtKB: P0ACT4 | |||||
Entity Groups | |||||
| Sequence Clusters | 30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity | ||||
| UniProt Group | P0ACT4 | ||||
Protein Feature ViewExpand | |||||
| |||||
Small Molecules
| Ligands 4 Unique | |||||
|---|---|---|---|---|---|
| ID | Chains | Name / Formula / InChI Key | 2D Diagram | 3D Interactions | |
| OTC Query on OTC | B [auth A] | OXYTETRACYCLINE C22 H24 N2 O9 IWVCMVBTMGNXQD-PXOLEDIWSA-N |  | Ligand Interaction | |
| MES Query on MES | G [auth A] | 2-(N-MORPHOLINO)-ETHANESULFONIC ACID C6 H13 N O4 S SXGZJKUKBWWHRA-UHFFFAOYSA-N |  | Ligand Interaction | |
| CL Query on CL | D [auth A], E [auth A], F [auth A] | CHLORIDE ION Cl VEXZGXHMUGYJMC-UHFFFAOYSA-M |  | Ligand Interaction | |
| MG Query on MG | C [auth A] | MAGNESIUM ION Mg JLVVSXFLKOJNIY-UHFFFAOYSA-N |  | Ligand Interaction | |
Experimental Data & Validation
Experimental Data
- Method: X-RAY DIFFRACTION
- Resolution: 1.44 Å
- R-Value Free: 0.205
- R-Value Work: 0.177
- R-Value Observed: 0.178
- Space Group: I 41 2 2
Unit Cell:
| Length ( Å ) | Angle ( ˚ ) |
|---|---|
| a = 66.893 | α = 90 |
| b = 66.893 | β = 90 |
| c = 181.553 | γ = 90 |
| Software Name | Purpose |
|---|---|
| REFMAC | refinement |
| HKL-2000 | data reduction |
| SCALEPACK | data scaling |
| REFMAC | phasing |
Entry History
Deposition Data
- Released Date: 2011-09-07 Deposition Author(s): Dalm, D., Proft, J., Palm, G.J., Hinrichs, W.
Revision History (Full details and data files)
- Version 1.0: 2011-09-07
Type: Initial release - Version 1.1: 2019-07-24
Changes: Data collection
