2XBD

INTERNAL XYLAN BINDING DOMAIN FROM CELLULOMONAS FIMI XYLANASE D, NMR, MINIMIZED AVERAGE STRUCTURE


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 50 
  • Conformers Submitted: 
  • Selection Criteria: MINIMIZED AVERAGE STRUCTURE, CALCULATED FROM 38 LOWEST ENERGY STRUCTURES 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

A family IIb xylan-binding domain has a similar secondary structure to a homologous family IIa cellulose-binding domain but different ligand specificity.

Simpson, P.J.Bolam, D.N.Cooper, A.Ciruela, A.Hazlewood, G.P.Gilbert, H.J.Williamson, M.P.

(1999) Structure Fold.Des. 7: 853-864

  • Primary Citation of Related Structures:  

  • PubMed Abstract: 
  • Many enzymes that digest polysaccharides contain separate polysaccharide-binding domains. Structures have been previously determined for a number of cellulose-binding domains (CBDs) from cellulases.

    Many enzymes that digest polysaccharides contain separate polysaccharide-binding domains. Structures have been previously determined for a number of cellulose-binding domains (CBDs) from cellulases.


    Organizational Affiliation

    Department of Molecular Biology and Biotechnology, Krebs Institute, University of Sheffield, UK.




Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
XYLANASE D
A
87Cellulomonas fimiMutation(s): 0 
Gene Names: xynD
EC: 3.2.1.8, 3.5.1.-
Find proteins for P54865 (Cellulomonas fimi)
Go to UniProtKB:  P54865
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 50 
  • Conformers Submitted: 
  • Selection Criteria: MINIMIZED AVERAGE STRUCTURE, CALCULATED FROM 38 LOWEST ENERGY STRUCTURES 
Software Package:
Software NamePurpose
X-PLORrefinement
X-PLORphasing
X-PLORmodel building

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 1999-07-21
    Type: Initial release
  • Version 1.1: 2008-03-25
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance