2WU1

Glucosamine-6-Phosphate Deaminase Complexed with the Allosteric Activator N-Acetyl-Glucoamine-6-Phosphate both in the Active and Allosteric sites.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.191 
  • R-Value Work: 0.149 

wwPDB Validation 3D Report Full Report


This is version 1.4 of the entry. See complete history

Literature

Glucosamine-6-Phosphate Deaminase Mechanism: The Substrate Piranosic Ring Opening

Rudino-Pinera, E.Rojas-Trejo, S.P.Calcagno, M.L.Horjales, E.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
GLUCOSAMINE-6-PHOSPHATE DEAMINASE
A, B
266Escherichia coli (strain K12)Mutation(s): 0 
Gene Names: nagB (glmD)
EC: 3.5.99.6
Find proteins for P0A759 (Escherichia coli (strain K12))
Go to UniProtKB:  P0A759
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
FGS
Query on FGS

Download SDF File 
Download CCD File 
A, B
5-(ACETYLAMINO)-5-DEOXY-1-O-PHOSPHONO-L-IDITOL
C8 H18 N O9 P
WHHOIWRDVIBHSP-RULNZFCNSA-N
 Ligand Interaction
16G
Query on 16G

Download SDF File 
Download CCD File 
A, B
N-ACETYL-D-GLUCOSAMINE-6-PHOSPHATE
C8 H16 N O9 P
BRGMHAYQAZFZDJ-PVFLNQBWSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.2 Å
  • R-Value Free: 0.191 
  • R-Value Work: 0.149 
  • Space Group: H 3 2
Unit Cell:
Length (Å)Angle (°)
a = 125.720α = 90.00
b = 125.720β = 90.00
c = 223.952γ = 120.00
Software Package:
Software NamePurpose
MOSFLMdata reduction
PHENIXrefinement
CNSphasing
SCALAdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-10-06
    Type: Initial release
  • Version 1.1: 2011-05-08
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance
  • Version 1.3: 2019-01-30
    Type: Data collection, Experimental preparation, Other
  • Version 1.4: 2019-05-22
    Type: Data collection, Experimental preparation