2WR6

Structure of the complex of RBP4 with linoleic acid


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.227 
  • R-Value Work: 0.187 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Identification of a Non-Retinoid Compound and Fatty Acids as Ligands for Retinol Binding Protein 4 and Their Implications in Diabetes

Huang, H.-J.Nanao, M.Stout, T.Rosen, J.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
RETINOL-BINDING PROTEIN 4
A
175Homo sapiensMutation(s): 0 
Gene Names: RBP4
Find proteins for P02753 (Homo sapiens)
Go to Gene View: RBP4
Go to UniProtKB:  P02753
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
CL
Query on CL

Download SDF File 
Download CCD File 
A
CHLORIDE ION
Cl
VEXZGXHMUGYJMC-UHFFFAOYSA-M
 Ligand Interaction
ODT
Query on ODT

Download SDF File 
Download CCD File 
A
(11E,13E,15Z)-OCTADECA-11,13,15-TRIENOIC ACID
11-TRANS-13-TRANS-15-CIS-OCTADECATRIENOIC ACID
C18 H30 O2
ZSXWVPXJLXTOQQ-ZRGCPWHVSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.8 Å
  • R-Value Free: 0.227 
  • R-Value Work: 0.187 
  • Space Group: H 3
Unit Cell:
Length (Å)Angle (°)
a = 102.558α = 90.00
b = 102.558β = 90.00
c = 73.355γ = 120.00
Software Package:
Software NamePurpose
XDSdata reduction
PHASERphasing
REFMACrefinement
XSCALEdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2010-09-15
    Type: Initial release
  • Version 1.1: 2011-05-08
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance