2WH5

Crystal structure of human acyl-CoA binding domain 4 complexed with stearoyl-CoA


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.60 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.206 
  • R-Value Observed: 0.207 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal Structure of Human Acyl-Coa Binding Domain 4

Shafqat, N.Yue, W.W.Oppermann, U.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
ACYL-COA-BINDING DOMAIN-CONTAINING PROTEIN 4A, B, C, D, E, F106Homo sapiensMutation(s): 0 
Gene Names: ACBD4HMFT0700
UniProt & NIH Common Fund Data Resources
Find proteins for Q8NC06 (Homo sapiens)
Explore Q8NC06 
Go to UniProtKB:  Q8NC06
PHAROS:  Q8NC06
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
ST9
Query on ST9

Download Ideal Coordinates CCD File 
H [auth A], J [auth B], L [auth C], N [auth D], Q [auth E], T [auth F]STEAROYL-COENZYME A
C39 H70 N7 O17 P3 S
SIARJEKBADXQJG-LFZQUHGESA-N
 Ligand Interaction
COA
Query on COA

Download Ideal Coordinates CCD File 
O [auth D], R [auth E]COENZYME A
C21 H36 N7 O16 P3 S
RGJOEKWQDUBAIZ-IBOSZNHHSA-N
 Ligand Interaction
STE
Query on STE

Download Ideal Coordinates CCD File 
G [auth A], I [auth B], K [auth C], M [auth D], P [auth E], S [auth F]STEARIC ACID
C18 H36 O2
QIQXTHQIDYTFRH-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.60 Å
  • R-Value Free: 0.236 
  • R-Value Work: 0.206 
  • R-Value Observed: 0.207 
  • Space Group: P 1 21 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 85.06α = 90
b = 95.1β = 110.28
c = 119.74γ = 90
Software Package:
Software NamePurpose
PHENIXrefinement
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2009-07-28
    Type: Initial release
  • Version 1.1: 2012-12-05
    Changes: Database references, Derived calculations, Other, Refinement description, Structure summary, Version format compliance
  • Version 1.2: 2013-09-25
    Changes: Advisory, Non-polymer description, Source and taxonomy