2VXP | pdb_00002vxp

The fourth FAS1 domain structure of human Bigh3

• PDB DOI: https://doi.org/10.2210/pdb2VXP/pdb

• Classification: CELL ADHESION
• Organism(s): Homo sapiens
• Expression System: Escherichia coli BL21(DE3)
• Mutation(s): No 


• Deposited: 2008-07-08 Released: 2009-07-21 
• Deposition Author(s): Yoo, J.-H., Cho, H.-S.

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Experimental Data Snapshot

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free: 
  0.285 (Depositor), 0.290 (DCC) 
• R-Value Work: 
  0.270 (Depositor), 0.270 (DCC) 
• R-Value Observed: 
  0.270 (Depositor) 

Literature

The Structural Analysis of the Fas1 Domain 4 of Big-H3 for Relationship with Corneal Dystrophy

Yoo, J.-H., Kim, E., Kim, J., Cho, H.-S.

To be published.

Biological Assembly 1  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 1 assigned by authors and generated by PQS (software)

Biological Assembly 2  

Global Symmetry: Asymmetric - C1 
Global Stoichiometry: Monomer - A1 

Biological assembly 2 assigned by authors and generated by PQS (software)

Macromolecule Content 

• Total Structure Weight: 28.51 kDa 
• Atom Count: 2,010 
• Modeled Residue Count: 262 
• Deposited Residue Count: 264 
• Unique protein chains: 1

Macromolecules

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
TRANSFORMING GROWTH FACTOR-BETA-INDUCED PROTEIN IG-H3	A, B	132	Homo sapiens	Mutation(s): 0
UniProt & NIH Common Fund Data Resources
Find proteins for Q15582 (Homo sapiens) Explore Q15582  Go to UniProtKB:  Q15582
PHAROS:  Q15582 GTEx:  ENSG00000120708

Experimental Data & Validation

Experimental Data

• Method: X-RAY DIFFRACTION
• Resolution: 2.50 Å
• R-Value Free:  0.285 (Depositor), 0.290 (DCC) 
• R-Value Work:  0.270 (Depositor), 0.270 (DCC) 
• R-Value Observed: 0.270 (Depositor) 

Space Group: P 6₅

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 62.934	α = 90
b = 62.934	β = 90
c = 143.29	γ = 120

Software Package:

Software Name	Purpose
CNS	refinement
DENZO	data reduction
SCALEPACK	data scaling
MOLREP	phasing

Structure Validation

Entry History 

Deposition Data

• Released Date: 2009-07-21 
Deposition Author(s): Yoo, J.-H., Cho, H.-S.

Revision History  

• Version 1.0: 2009-07-21
  Type: Initial release
  
• Version 1.1: 2011-05-07
  Changes: Version format compliance
• Version 1.2: 2011-07-13
  Changes: Version format compliance
• Version 1.3: 2024-05-08
  Changes: Data collection, Database references, Other