2VRF

CRYSTAL STRUCTURE OF THE HUMAN BETA-2-SYNTROPHIN PDZ DOMAIN


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.247 
  • R-Value Work: 0.184 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal Structure of the Human Beta-2-Syntrophin Pdz Domain

Sun, Z.Roos, A.K.Pike, A.C.W.Pilka, E.S.Cooper, C.Elkins, J.M.Murray, J.Arrowsmith, C.H.Doyle, D.Edwards, A.von Delft, F.Bountra, C.Oppermann, U.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
BETA-2-SYNTROPHIN
A, B, C, D
95Homo sapiensMutation(s): 0 
Gene Names: SNTB2 (D16S2531E, SNT2B2, SNTL)
Find proteins for Q13425 (Homo sapiens)
Go to Gene View: SNTB2
Go to UniProtKB:  Q13425
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download SDF File 
Download CCD File 
A, C
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2 Å
  • R-Value Free: 0.247 
  • R-Value Work: 0.184 
  • Space Group: P 1 21 1
Unit Cell:
Length (Å)Angle (°)
a = 56.687α = 90.00
b = 29.503β = 95.78
c = 128.382γ = 90.00
Software Package:
Software NamePurpose
PHASERphasing
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2008-04-22
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.2: 2012-12-05
    Type: Database references, Derived calculations, Other, Structure summary
  • Version 1.3: 2018-01-24
    Type: Database references