2VD2 | pdb_00002vd2

The crystal structure of HisG from B. subtilis

PDB DOI: https://doi.org/10.2210/pdb2VD2/pdb

Classification: TRANSFERASE
Organism(s): Bacillus subtilis
Expression System: Escherichia coli BL21
Mutation(s): No

Deposited: 2007-09-28 Released: 2008-11-04
Deposition Author(s): Lohkamp, B., Riboldi-Tunniclife, A., Lapthorn, A.J.

Experimental Data Snapshot

Method: X-RAY DIFFRACTION
Resolution: 2.85 Å
R-Value Free:
0.266 (Depositor), 0.286 (DCC)
R-Value Work:
0.236 (Depositor), 0.251 (DCC)
R-Value Observed:
0.237 (Depositor)

wwPDB Validation 3D Report Full Report

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This is version 1.2 of the entry. See complete history.

Literature

The Crystal Structure of Hisg from B. Subtilis

Lohkamp, B., Riboldi-Tunniclife, A., Lapthorn, A.J.

To be published.

Macromolecule Content

Total Structure Weight: 23.72 kDa
Atom Count: 1,611
Modeled Residue Count: 212
Deposited Residue Count: 214
Unique protein chains: 1

Macromolecules

Find similar proteins by:

Entity ID: 1
Molecule	Chains	Sequence Length	Organism	Details	Image
ATP PHOSPHORIBOSYLTRANSFERASE	A	214	Bacillus subtilis	Mutation(s): 0 EC: 2.4.2.17
UniProt
Find proteins for O34520 (Bacillus subtilis (strain 168)) Explore O34520 Go to UniProtKB: O34520
Entity Groups
Sequence Clusters	30% Identity 50% Identity 70% Identity 90% Identity 95% Identity 100% Identity
UniProt Group	O34520
Sequence Annotations Expand
Reference Sequence

Experimental Data & Validation

Experimental Data

Method: X-RAY DIFFRACTION
Resolution: 2.85 Å
R-Value Free: 0.266 (Depositor), 0.286 (DCC)
R-Value Work: 0.236 (Depositor), 0.251 (DCC)
R-Value Observed: 0.237 (Depositor)

Space Group: P 4₃ 2 2

Unit Cell:

Length ( Å )	Angle ( ˚ )
a = 85.937	α = 90
b = 85.937	β = 90
c = 75.948	γ = 90

Software Package:

Software Name	Purpose
REFMAC	refinement

Structure Validation

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Entry History

Deposition Data

Released Date: 2008-11-04

Deposition Author(s):

Riboldi-Tunniclife, A.

Revision History (Full details and data files)

Version 1.0: 2008-11-04
Type: Initial release
Version 1.1: 2011-07-13
Changes: Advisory, Version format compliance
Version 1.2: 2024-05-08
Changes: Data collection, Database references, Other

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RCSB PDB Core Operations are funded by the U.S. National Science Foundation (DBI-2321666), the US Department of Energy (DE-SC0019749), and the National Cancer Institute, National Institute of Allergy and Infectious Diseases, and National Institute of General Medical Sciences of the National Institutes of Health under grant R01GM157729. RCSB PDB uses resources of the National Energy Research Scientific Computing Center (NERSC), a Department of Energy User Facility.