2V8U

Atomic resolution structure of Mn catalase from Thermus Thermophilus


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Free: 0.121 
  • R-Value Work: 0.106 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Three-Dimentional Structure of the Enzyme Dimanganese Catalase from Thermus Thermophilus at 1 Angstrom Resolution

Antonyuk, S.V.Melik-Adamyan, W.R.Popov, A.N.Lamsin, V.S.Hempstead, P.D.Harrison, P.M.Artymyuk, P.J.Barynin, V.V.

(2000) Crystallogr.Rep.(Transl. Kristallografiya) 45: 105


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
MANGANESE-CONTAINING PSEUDOCATALASE
A, B
302Thermus thermophilusMutation(s): 0 
Gene Names: cat
EC: 1.11.1.6
Find proteins for Q84DB4 (Thermus thermophilus)
Go to UniProtKB:  Q84DB4
Small Molecules
Ligands 4 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
MN
Query on MN

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A, B
MANGANESE (II) ION
Mn
WAEMQWOKJMHJLA-UHFFFAOYSA-N
 Ligand Interaction
LI
Query on LI

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A, B
LITHIUM ION
Li
HBBGRARXTFLTSG-UHFFFAOYSA-N
 Ligand Interaction
SO4
Query on SO4

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A, B
SULFATE ION
O4 S
QAOWNCQODCNURD-UHFFFAOYSA-L
 Ligand Interaction
O
Query on O

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Download CCD File 
A, B
OXYGEN ATOM
O
XLYOFNOQVPJJNP-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.05 Å
  • R-Value Free: 0.121 
  • R-Value Work: 0.106 
  • Space Group: P 21 3
Unit Cell:
Length (Å)Angle (°)
a = 132.300α = 90.00
b = 132.300β = 90.00
c = 132.300γ = 90.00
Software Package:
Software NamePurpose
REFMACrefinement
MOLREPphasing
SCALEPACKdata scaling
DENZOdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-09-25
    Type: Initial release
  • Version 1.1: 2011-05-08
    Type: Version format compliance
  • Version 1.2: 2011-07-13
    Type: Version format compliance