2V5F

Crystal structure of wild type peptide-binding domain of human type I collagen prolyl 4-hydroxylase.


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.265 
  • R-Value Work: 0.196 

wwPDB Validation 3D Report Full Report


This is version 1.3 of the entry. See complete history

Literature

Crystal Structure of Wild Type Peptide-Binding Domain of Human Type I Collagen Prolyl 4- Hydroxylase.

Pekkala, M.Hieta, R.Kivirikko, K.Myllyharju, J.Wierenga, R.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
PROLYL 4-HYDROXYLASE SUBUNIT ALPHA-1
A
104Homo sapiensMutation(s): 0 
Gene Names: P4HA1 (P4HA)
EC: 1.14.11.2
Find proteins for P13674 (Homo sapiens)
Go to Gene View: P4HA1
Go to UniProtKB:  P13674
Entity ID: 2
MoleculeChainsSequence LengthOrganismDetails
HEXA-HISTIDINE PEPTIDE
X
6N/AMutation(s): 0 
Protein Feature View is not available: No corresponding UniProt sequence found.
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.03 Å
  • R-Value Free: 0.265 
  • R-Value Work: 0.196 
  • Space Group: P 21 21 21
Unit Cell:
Length (Å)Angle (°)
a = 37.472α = 90.00
b = 59.046β = 90.00
c = 61.668γ = 90.00
Software Package:
Software NamePurpose
SCALAdata scaling
PHASERphasing
REFMACrefinement
MOSFLMdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2009-11-17
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.2: 2016-12-21
    Type: Source and taxonomy, Structure summary
  • Version 1.3: 2017-06-28
    Type: Data collection