2V1R

Yeast Pex13 SH3 domain complexed with a peptide from Pex14 at 2.1 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.229 
  • R-Value Work: 0.191 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Structural Genomics of Yeast SH3 Domains

Kursula, P.Kursula, I.Pinotsis, N.Lehmann, F.Zou, P.Song, Y.H.Wilmanns, M.

To be published.

Macromolecules
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Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
PEROXISOMAL MEMBRANE PROTEIN PAS20A, B80Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for P80667 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore P80667 
Go to UniProtKB:  P80667
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UniProt GroupP80667
Protein Feature View
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  • Reference Sequence

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Entity ID: 2
MoleculeChainsSequence LengthOrganismDetailsImage
PEX14C [auth P],
D [auth Q],
E [auth R]
15Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for P53112 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore P53112 
Go to UniProtKB:  P53112
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupP53112
Protein Feature View
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.10 Å
  • R-Value Free: 0.229 
  • R-Value Work: 0.191 
  • Space Group: P 1
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 36.44α = 86.85
b = 39.09β = 65.46
c = 39.14γ = 62.04
Software Package:
Software NamePurpose
PHENIXrefinement
XDSdata reduction
XSCALEdata scaling
MOLREPphasing
PHENIXrefinement

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2008-06-03
    Type: Initial release
  • Version 1.1: 2013-08-07
    Changes: Derived calculations, Other, Version format compliance
  • Version 1.2: 2019-07-24
    Changes: Data collection, Derived calculations