2UYY

Structure of the cytokine-like nuclear factor n-pac


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.170 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history


Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
N-PAC PROTEIN
A, B, C, D
316Homo sapiensGene Names: GLYR1 (HIBDL, NP60)
EC: 1.-.-.-
Find proteins for Q49A26 (Homo sapiens)
Go to Gene View: GLYR1
Go to UniProtKB:  Q49A26
Small Molecules
Ligands 2 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
K
Query on K

Download SDF File 
Download CCD File 
A, B, C, D
POTASSIUM ION
K
NPYPAHLBTDXSSS-UHFFFAOYSA-N
 Ligand Interaction
NA7
Query on NA7

Download SDF File 
Download CCD File 
A, D
[(2R,3R,4R,5R)-5-(6-AMINO-9H-PURIN-9-YL)-3-HYDROXY-4-(PHOSPHONOOXY)TETRAHYDROFURAN-2-YL]METHYL [(2R,3S,4S)-3,4-DIHYDROXYTETRAHYDROFURAN-2-YL]METHYL DIHYDROGEN DIPHOSPHATE
C15 H24 N5 O16 P3
XDDBFIXGEVGCEU-AOOZFPJJSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 2.5 Å
  • R-Value Free: 0.211 
  • R-Value Work: 0.170 
  • Space Group: H 3
Unit Cell:
Length (Å)Angle (°)
a = 134.180α = 90.00
b = 134.180β = 90.00
c = 261.463γ = 120.00
Software Package:
Software NamePurpose
REFMACrefinement
PHASERphasing
XDSdata scaling
XDSdata reduction

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Revision History 

  • Version 1.0: 2007-07-03
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.2: 2018-01-24
    Type: Database references, Structure summary