2UXW

Crystal structure of human very long chain acyl-CoA dehydrogenase (ACADVL)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.170 
  • R-Value Work: 0.148 
  • R-Value Observed: 0.149 

wwPDB Validation   3D Report Full Report


This is version 1.2 of the entry. See complete history


Literature

Crystal Structure of Human Very Long Chain Acyl- Coa Dehydrogenase (Acadvl)

Pike, A.C.W.Hozjan, V.Smee, C.Berridge, G.Burgess, N.Salah, E.Bunkoczi, G.Uppenberg, J.Ugochukwu, E.von Delft, F.Arrowsmith, C.H.Edwards, A.Weigelt, J.Sundstrom, M.Oppermann, U.

To be published.

Macromolecules
Find similar proteins by:  (by identity cutoff)  |  Structure
Entity ID: 1
MoleculeChainsSequence LengthOrganismDetailsImage
VERY-LONG-CHAIN SPECIFIC ACYL-COA DEHYDROGENASEA607Homo sapiensMutation(s): 0 
Gene Names: ACADVLVLCAD
EC: 1.3.99 (PDB Primary Data), 1.3.8.9 (UniProt)
Find proteins for P49748 (Homo sapiens)
Explore P49748 
Go to UniProtKB:  P49748
NIH Common Fund Data Resources
PHAROS:  P49748
Protein Feature View
Expand
  • Reference Sequence
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
TH3
Query on TH3

Download Ideal Coordinates CCD File 
E [auth A]TRANS DELTA2 PALMITENOYL-COENZYMEA
C37 H64 N7 O17 P3 S
JUPAQFRKPHPXLD-WUKNDPDISA-N
 Ligand Interaction
FAD
Query on FAD

Download Ideal Coordinates CCD File 
D [auth A]FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
 Ligand Interaction
EDO
Query on EDO

Download Ideal Coordinates CCD File 
B [auth A], C [auth A]1,2-ETHANEDIOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.170 
  • R-Value Work: 0.148 
  • R-Value Observed: 0.149 
  • Space Group: C 2 2 21
Unit Cell:
Length ( Å )Angle ( ˚ )
a = 75.001α = 90
b = 108.173β = 90
c = 149.731γ = 90
Software Package:
Software NamePurpose
REFMACrefinement
MOSFLMdata reduction
SCALAdata scaling
PHASERphasing

Structure Validation

View Full Validation Report



Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2007-05-01
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Advisory, Version format compliance
  • Version 1.2: 2018-01-24
    Changes: Database references, Structure summary