2UXW

Crystal structure of human very long chain acyl-CoA dehydrogenase (ACADVL)


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.170 
  • R-Value Work: 0.148 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal Structure of Human Very Long Chain Acyl- Coa Dehydrogenase (Acadvl)

Pike, A.C.W.Hozjan, V.Smee, C.Berridge, G.Burgess, N.Salah, E.Bunkoczi, G.Uppenberg, J.Ugochukwu, E.von Delft, F.Arrowsmith, C.H.Edwards, A.Weigelt, J.Sundstrom, M.Oppermann, U.

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
VERY-LONG-CHAIN SPECIFIC ACYL-COA DEHYDROGENASE
A
607Homo sapiensMutation(s): 0 
Gene Names: ACADVL (VLCAD)
EC: 1.3.8.9
Find proteins for P49748 (Homo sapiens)
Go to Gene View: ACADVL
Go to UniProtKB:  P49748
Small Molecules
Ligands 3 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
TH3
Query on TH3

Download SDF File 
Download CCD File 
A
TRANS DELTA2 PALMITENOYL-COENZYMEA
C37 H64 N7 O17 P3 S
JUPAQFRKPHPXLD-WUKNDPDISA-N
 Ligand Interaction
FAD
Query on FAD

Download SDF File 
Download CCD File 
A
FLAVIN-ADENINE DINUCLEOTIDE
C27 H33 N9 O15 P2
VWWQXMAJTJZDQX-UYBVJOGSSA-N
 Ligand Interaction
EDO
Query on EDO

Download SDF File 
Download CCD File 
A
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Experimental Data & Validation

Experimental Data

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.45 Å
  • R-Value Free: 0.170 
  • R-Value Work: 0.148 
  • Space Group: C 2 2 21
Unit Cell:
Length (Å)Angle (°)
a = 75.001α = 90.00
b = 108.173β = 90.00
c = 149.731γ = 90.00
Software Package:
Software NamePurpose
MOSFLMdata reduction
REFMACrefinement
PHASERphasing
SCALAdata scaling

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-05-01
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Advisory, Version format compliance
  • Version 1.2: 2018-01-24
    Type: Database references, Structure summary