2RQW

Solution structure of Bem1p SH3CI domain complexed with Ste20p-PRR peptide


Experimental Data Snapshot

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

wwPDB Validation   3D Report Full Report


This is version 1.1 of the entry. See complete history


Literature

Solution structure of a novel Cdc42-binding module of Bem1 and its interaction with Ste20 and Cdc42

Takaku, T.Ogura, K.Kumeta, H.Yoshida, N.Inagaki, F.

(2010) J Biol Chem 285: 19346-19353

  • DOI: https://doi.org/10.1074/jbc.M110.116749
  • Primary Citation of Related Structures:  
    2RQV, 2RQW

  • PubMed Abstract: 

    Bem1 is a scaffold protein essential for the establishment of cell polarity in Saccharomyces cerevisiae. This work reports the solution structure of a Cdc42 binding module of Bem1 comprising the second SH3 domain (SH3b) and its C-terminal flanking region termed Cdc42 interacting (CI). First, the structure of Bem1 SH3b-CI was determined by NMR spectroscopy, which shows that Bem1 SH3b-CI is a structurally and functionally related domain that binds Cdc42. Next, the solution structure of Bem1 SH3b-CI in complex with the proline-rich region of p21-activated kinase Ste20 (Ste20 PRR) was determined. Finally, the interaction surface of Bem1 SH3b-CI with Cdc42 was identified based on chemical shift perturbation studies which reveals that Bem1 SH3b-CI interacts simultaneously with both Ste20 PRR and Cdc42 using the opposite surfaces. Thus, Bem1 can tether Cdc42 and Ste20 in close proximity so that Cdc42 can efficiently interact with Ste20 Cdc42 and Rac interactive binding (CRIB). Based on the present results together with the previous biochemical studies (Lamson, R. E., Winters, M. J., and Pryciak, P. M. (2002) Mol. Cell. Biol. 22, 2939-2951 and Winters, M. J., and Pryciak, P. M. (2005) Mol. Cell. Biol. 25, 2177-2190), a model was suggested that the autoinhibition of Ste20 kinase activity by CRIB is released through the Cdc42-CRIB interaction, which is mediated by Bem1, and Ste20 is subsequently activated, an initial step for the establishment of the cell polarity.


  • Organizational Affiliation

    Laboratory of Structural Biology, Graduate School of Life Science, Hokkaido University, N-12, W-6 Kita-ku, Sapporo 060-0812, Japan.


Macromolecules
Find similar proteins by:  (by identity cutoff)  |  3D Structure
Entity ID: 1
MoleculeChains Sequence LengthOrganismDetailsImage
Bud emergence protein 1105Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for P29366 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore P29366 
Go to UniProtKB:  P29366
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UniProt GroupP29366
Sequence Annotations
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  • Reference Sequence

Find similar proteins by:  Sequence   |   3D Structure  

Entity ID: 2
MoleculeChains Sequence LengthOrganismDetailsImage
24-meric peptide from Serine/threonine-protein kinase STE2024Saccharomyces cerevisiaeMutation(s): 0 
UniProt
Find proteins for Q03497 (Saccharomyces cerevisiae (strain ATCC 204508 / S288c))
Explore Q03497 
Go to UniProtKB:  Q03497
Entity Groups  
Sequence Clusters30% Identity50% Identity70% Identity90% Identity95% Identity100% Identity
UniProt GroupQ03497
Sequence Annotations
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  • Reference Sequence
Experimental Data & Validation

Experimental Data

  • Method: SOLUTION NMR
  • Conformers Calculated: 100 
  • Conformers Submitted: 20 
  • Selection Criteria: target function 

Structure Validation

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Entry History 

Deposition Data

Revision History  (Full details and data files)

  • Version 1.0: 2010-04-21
    Type: Initial release
  • Version 1.1: 2011-07-13
    Changes: Version format compliance