2RH0

Crystal structure of NudC domain-containing protein 2 (13542905) from Mus musculus at 1.95 A resolution


Experimental Data Snapshot

  • Method: X-RAY DIFFRACTION
  • Resolution: 1.95 Å
  • R-Value Free: 0.235 
  • R-Value Work: 0.190 

wwPDB Validation 3D Report Full Report


This is version 1.2 of the entry. See complete history

Literature

Crystal structure of NudC domain-containing protein 2 (13542905) from Mus musculus at 1.95 A resolution

Joint Center for Structural Genomics (JCSG)

To be published.

Macromolecules

Find similar proteins by: Sequence  |  Structure

Entity ID: 1
MoleculeChainsSequence LengthOrganismDetails
NudC domain-containing protein 2
A, B, C, D
157Mus musculusMutation(s): 0 
Gene Names: Nudcd2 (D11Ertd603e)
Find proteins for Q9CQ48 (Mus musculus)
Go to UniProtKB:  Q9CQ48
Small Molecules
Ligands 1 Unique
IDChainsName / Formula / InChI Key2D Diagram3D Interactions
EDO
Query on EDO

Download SDF File 
Download CCD File 
B, C, D
1,2-ETHANEDIOL
ETHYLENE GLYCOL
C2 H6 O2
LYCAIKOWRPUZTN-UHFFFAOYSA-N
 Ligand Interaction
Modified Residues  1 Unique
IDChainsTypeFormula2D DiagramParent
MSE
Query on MSE
A, B, C, D
L-PEPTIDE LINKINGC5 H11 N O2 SeMET
Experimental Data & Validation

Experimental Data

Unit Cell:
Length (Å)Angle (°)
a = 44.568α = 74.51
b = 64.504β = 81.06
c = 64.423γ = 81.22
Software Package:
Software NamePurpose
PHENIXrefinement
SOLVEphasing
REFMACrefinement
MolProbitymodel building
SCALAdata scaling
MOSFLMdata reduction
SHELXDphasing
PDB_EXTRACTdata extraction
MAR345data collection

Structure Validation

View Full Validation Report or Ramachandran Plots



Entry History 

Deposition Data

Revision History 

  • Version 1.0: 2007-10-16
    Type: Initial release
  • Version 1.1: 2011-07-13
    Type: Version format compliance
  • Version 1.2: 2017-10-25
    Type: Refinement description